RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 COL15A1P39059 1388 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 NPHP3-ACAD11A0A0J9YXS1 232 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CPA2P48052 419 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 TCP10Q12799 353 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 BZW1Q7L1Q6 419 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 SNF8Q96H20 258 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CCDC87Q9NVE4 849 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 PRDX5P30044 214 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 ESRRGP62508 458 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
CASC3-201ENST00000264645 IZUMO3Q5VZ72 239 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 TMC3Q7Z5M5 1100 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 ERICH1Q86X53 443 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 NUP85Q9BW27 656 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 DEPDC5O75140 1603 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 GCLMP48507 274 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 MED21Q13503 144 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 ZBED8Q8IZ13 594 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 PDIK1LQ8N165 341 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
CASC3-201ENST00000264645 MIS12Q9H081 205 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 SEMA6BQ9H3T3 888 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 SUCLA2Q9P2R7 463 aaPredicted RBP16.11■□□□□ 0.17
CASC3-201ENST00000264645 ALG6Q9Y672 507 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 CLDN3O15551 220 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 ASAP2O43150 1006 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 KRT1P04264 644 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 SOX5P35711 763 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 BTDP43251 543 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 TRPC3Q13507 836 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 GEN1Q17RS7 908 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
CASC3-201ENST00000264645 NAALADL2Q58DX5 795 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 LRGUKQ96M69 825 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
CASC3-201ENST00000264645 UBXN2AP68543 259 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 MAPK7Q13164 816 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 TRIM42Q8IWZ5 723 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 C18orf8Q96DM3 657 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 A1CFQ9NQ94 594 aaKnown RBP16.1■□□□□ 0.17
CASC3-201ENST00000264645 GAP43P17677 238 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 TROAPQ12815 778 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 CCDC14Q49A88 953 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 MXD3Q9BW11 206 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
CASC3-201ENST00000264645 KBTBD4Q9NVX7 518 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 GOLGA8IPA6NC78 632 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 DNM1LO00429 736 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 PBX1P40424 430 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 PDE1BQ01064 536 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 STAT4Q14765 748 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
CASC3-201ENST00000264645 ROPN1BQ9BZX4 212 aaPredicted RBP16.1■□□□□ 0.17
CASC3-201ENST00000264645 ROPN1Q9HAT0 212 aaPredicted RBP16.1■□□□□ 0.17
CASC3-201ENST00000264645 GGA2Q9UJY4 613 aa16.1■□□□□ 0.17
CASC3-201ENST00000264645 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 ENO1P06733 434 aaKnown RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 HOXA7P31268 230 aaPredicted RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 CAV1Q03135 178 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 MFSD14BQ5SR56 506 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 GJB7Q6PEY0 223 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 COMMD10Q9Y6G5 202 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 H7C0C1 242 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 ATP5OP48047 213 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 PHEXP78562 749 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 CRLF3Q8IUI8 442 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 TMEM237Q96Q45 408 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 FAM118BQ9BPY3 351 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 OVOS2A0A0J9YW53 1432 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 OVOS2Q6IE36 1432 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 COPEO14579 308 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 TTLL1O95922 423 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 RFC5P40937 340 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 THOC5Q13769 683 aaKnown RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 ACTRT1Q8TDG2 376 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 RBM15Q96T37 977 aaKnown RBP eCLIP16.09■□□□□ 0.173e-8■■■■■ 27.2
CASC3-201ENST00000264645 KLF6Q99612 283 aaPredicted RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 PDIA2Q13087 525 aaKnown RBP16.09■□□□□ 0.17
CASC3-201ENST00000264645 MTM1Q13496 603 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 CARD9Q9H257 536 aa16.09■□□□□ 0.17
CASC3-201ENST00000264645 DCLRE1BQ9H816 532 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms