RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DDX47Q9H0S4 455 aaKnown RBP17.93■□□□□ 0.46
PHRF1-201ENST00000264555 STRIP2Q9ULQ0 834 aa17.93■□□□□ 0.46
PHRF1-201ENST00000264555 GPC3P51654 580 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 GYS2P54840 703 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 POLR3CQ9BUI4 534 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-201ENST00000264555 MRPL4Q9BYD3 311 aaKnown RBP17.92■□□□□ 0.46
PHRF1-201ENST00000264555 HSPBP1Q9NZL4 362 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 NOC2LQ9Y3T9 749 aaKnown RBP17.92■□□□□ 0.46
PHRF1-201ENST00000264555 KIAA0391O15091 583 aaKnown RBP17.92■□□□□ 0.46
PHRF1-201ENST00000264555 TSNAXIP1Q2TAA8 658 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 CATSPER3Q86XQ3 398 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 LMNTD2Q8IXW0 634 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 C11orf70Q9BRQ4 267 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 AGO2Q9UKV8 859 aaKnown RBP17.92■□□□□ 0.46
PHRF1-201ENST00000264555 EXOC1LA0A1B0GW35 172 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 DGAT1O75907 488 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 VSNL1P62760 191 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 TRIM72Q6ZMU5 477 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 MICALL2Q8IY33 904 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 AP5Z1O43299 807 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 PLS3P13797 630 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 AP3M2P53677 418 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 MOXD1Q6UVY6 613 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 CENPUQ71F23 418 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 EFCAB13Q8IY85 973 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 COG1Q8WTW3 980 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 MXRA8Q9BRK3 442 aa17.92■□□□□ 0.46
PHRF1-201ENST00000264555 COPB2P35606 906 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 NAA25Q14CX7 972 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 TEX13BQ9BXU2 312 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 RBAKQ9NYW8 714 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 FAM187AA6NFU0 413 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 C19orf81C9J6K1 198 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 ZNF211Q13398 564 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 EHD4Q9H223 541 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 CAV1Q03135 178 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 PRPSAP1Q14558 356 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 METTL23Q86XA0 190 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 SYN2Q92777 582 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 LRRC4Q9HBW1 653 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 ESYT3A0FGR9 886 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 CPP00450 1065 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 GNA15P30679 374 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 GABPAQ06546 454 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 REXO1L1PQ8IX06 675 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 MKNK1Q9BUB5 465 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 ACTN1P12814 892 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 IFRD2Q12894 506 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 CATSPER4Q7RTX7 472 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 PDIK1LQ8N165 341 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-201ENST00000264555 ZWILCHQ9H900 591 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 TRIM10Q9UDY6 481 aa17.91■□□□□ 0.46
PHRF1-201ENST00000264555 RTN2O75298 545 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 GGPS1O95749 300 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 TBK1Q9UHD2 729 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
PHRF1-201ENST00000264555 NCAPHQ15003 741 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 RIOX1Q9H6W3 641 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 GMNNO75496 209 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 ACSL3O95573 720 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 SPATA24Q86W54 205 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 TTC13Q8NBP0 860 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 NCAPGQ9BPX3 1015 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 ZNF185O15231 689 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 KLK7P49862 253 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 EFNA5P52803 228 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 PDE1BQ01064 536 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 CCNYQ8ND76 341 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 HEMGNQ9BXL5 484 aa17.9■□□□□ 0.46
PHRF1-201ENST00000264555 ADCY1Q08828 1119 aa17.89■□□□□ 0.46
PHRF1-201ENST00000264555 NAB2Q15742 525 aa17.89■□□□□ 0.46
PHRF1-201ENST00000264555 TRIM42Q8IWZ5 723 aa17.89■□□□□ 0.46
PHRF1-201ENST00000264555 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.46
PHRF1-201ENST00000264555 FAM205AQ6ZU69 1335 aa17.89■□□□□ 0.46
PHRF1-201ENST00000264555 NFIAQ12857 509 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 CYFIP1Q7L576 1253 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 LRRC1Q9BTT6 524 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 C3P01024 1663 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 NR3C2P08235 984 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 ZSCAN20P17040 1043 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-201ENST00000264555 KCNV1Q6PIU1 500 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 FAM49AQ9H0Q0 323 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-201ENST00000264555 MT-ND3P03897 115 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 Q3C1V9 767 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 SIX6OS1Q8N1H7 587 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 TMEM39BQ9GZU3 492 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 IL17RBQ9NRM6 502 aa17.89■□□□□ 0.45
PHRF1-201ENST00000264555 IP6K2Q9UHH9 426 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms