RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SETDB1Q15047 1291 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEBQ6S5H4 581 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 AGGF1Q8N302 714 aaeCLIP13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 PRELID2Q8N945 189 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 CTNNAL1Q9UBT7 734 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 LRRC42Q9Y546 428 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 ALG6Q9Y672 507 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 AHCYL1O43865 530 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 UNC5CO95185 931 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 PLCG2P16885 1265 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 RFX1P22670 979 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 PSMC2P35998 433 aaKnown RBP13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 RWDD2BP57060 319 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 GIT2Q14161 759 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 CYP1B1Q16678 543 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 ARSHQ5FYA8 562 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 PPP1R21Q6ZMI0 780 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 CCDC105Q8IYK2 499 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 WNT8AQ9H1J5 351 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 KCNK9Q9NPC2 374 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
CHMP2B-201ENST00000263780 FESP07332 822 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 STX2P32856 288 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 COPB2P35606 906 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 PEX19P40855 299 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 MRPS35P82673 323 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 SPICE1Q8N0Z3 855 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 KIF2BQ8N4N8 673 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 UHMK1Q8TAS1 419 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 MGARPQ8TDB4 240 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 ZSWIM1Q9BR11 485 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 ANKIB1Q9P2G1 1089 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 KLHL33A6NCF5 533 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 STRN3Q13033 797 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 NFIL3Q16649 462 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 INTS8Q75QN2 995 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 ALG3Q92685 438 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 SYT11Q9BT88 431 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 MKNK1Q9BUB5 465 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 OSBPL1AQ9BXW6 950 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 WHRNQ9P202 907 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 CPSF2Q9P2I0 782 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 GGT7Q9UJ14 662 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 AJAP1Q9UKB5 411 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 PCDHA3Q9Y5H8 950 aa13.32□□□□□ -0.28
CHMP2B-201ENST00000263780 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 TCEA3O75764 348 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 GAP43P17677 238 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 RASSF2P50749 326 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CASP5P51878 434 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 LRRC14Q15048 493 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 GJB7Q6PEY0 223 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 FAM186BQ8IYM0 893 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CFAP61Q8NHU2 1237 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 SH3TC2Q8TF17 1288 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 TGS1Q96RS0 853 aaKnown RBP13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 RNPEPL1Q9HAU8 725 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CTTNBP2NLQ9P2B4 639 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 RPL26L1Q9UNX3 145 aaKnown RBP13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 TBCAO75347 108 aaKnown RBP13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 ECEL1O95672 775 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 EYA4O95677 639 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CALB2P22676 271 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CAV1Q03135 178 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 BIRC2Q13490 618 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 MTFR1Q15390 333 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 UBE2SQ16763 222 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 MOXD1Q6UVY6 613 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 SYDE1Q6ZW31 735 aaPredicted RBP13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 TMEM237Q96Q45 408 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CCDC77Q9BR77 488 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 PLVAPQ9BX97 442 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 TMOD4Q9NZQ9 345 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 SNED1Q8TER0 1413 aa13.31□□□□□ -0.28
CHMP2B-201ENST00000263780 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 SNUPNO95149 360 aaKnown RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 LMNAP02545 664 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms