RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 LGR5O75473 907 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 KRT13P13646 458 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 RAPGEF1Q13905 1077 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 SLC39A4Q6P5W5 647 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 TRIM10Q9UDY6 481 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 GOLGA8IPA6NC78 632 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 GOLGA8JA6NMD2 632 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 IPO7O95373 1038 aaKnown RBP17.24■□□□□ 0.35
VPS26A-201ENST00000263559 GLRA2P23416 452 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 MARK3P27448 753 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 ARL2P36404 184 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 KIF11P52732 1056 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF569Q5MCW4 686 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 GPR142Q7Z601 462 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 DEF6Q9H4E7 631 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 AIPL1Q9NZN9 384 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 DYNC1I1O14576 645 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 RFC5P40937 340 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 VAMP7P51809 220 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 ASTE1Q2TB18 679 aaPredicted RBP17.24■□□□□ 0.35
VPS26A-201ENST00000263559 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 HAUS4Q9H6D7 363 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 GUCA1BQ9UMX6 200 aa17.24■□□□□ 0.35
VPS26A-201ENST00000263559 DIS3Q9Y2L1 958 aaKnown RBP17.24■□□□□ 0.35
VPS26A-201ENST00000263559 RCCD1A6NED2 376 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 MAPK13O15264 365 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 AKR1B10O60218 316 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SERPING1P05155 500 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 GJB7Q6PEY0 223 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 PLEKHO2Q8TD55 490 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 FBXL5Q9UKA1 691 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SSU72P8A0A1W2PR75 194 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 H0YCG3 227 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 LCA5LO95447 670 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 ADRB2P07550 413 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 ARID5AQ03989 594 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SPA17Q15506 151 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 FAM110CQ1W6H9 321 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 CBWD2Q8IUF1 395 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 BBXQ8WY36 941 aaPredicted RBP17.23■□□□□ 0.35
VPS26A-201ENST00000263559 FAM167AQ96KS9 214 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 SPAG5Q96R06 1193 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
VPS26A-201ENST00000263559 EMSYQ7Z589 1322 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 MAFO75444 373 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-201ENST00000263559 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-201ENST00000263559 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 CCDC122Q5T0U0 273 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 GJC2Q5T442 439 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-201ENST00000263559 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 HNRNPDLO14979 420 aaKnown RBP17.22■□□□□ 0.35
VPS26A-201ENST00000263559 NAMPTP43490 491 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 MYL7Q01449 175 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
VPS26A-201ENST00000263559 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 SLC35F6Q8N357 371 aa17.22■□□□□ 0.35
VPS26A-201ENST00000263559 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 VAV2P52735 878 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 GFPT1Q06210 699 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 DRP2Q13474 957 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 GRB14Q14449 540 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 PLCB4Q15147 1175 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ASIC2Q16515 512 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ATP8B4Q8TF62 1192 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 POMGNT1Q8WZA1 660 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 BICD1Q96G01 975 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 PCDHA13Q9Y5I0 950 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ZBTB42B2RXF5 422 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ENOX2Q16206 610 aaKnown RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 MAMDC4Q6UXC1 1216 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 IRF2BP2Q7Z5L9 587 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 DEPTORQ8TB45 409 aa17.21■□□□□ 0.35
VPS26A-201ENST00000263559 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
VPS26A-201ENST00000263559 MYO1AQ9UBC5 1043 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms