RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ABCA8O94911 1581 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 APOA1P02647 267 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 PDCLQ13371 301 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 PODNQ7Z5L7 613 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 DACH2Q96NX9 599 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 GTSE1Q9NYZ3 720 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 IP6K2Q9UHH9 426 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 KIF1CO43896 1103 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 MKRN3Q13064 507 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ENOSF1Q7L5Y1 443 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 DGKHQ86XP1 1220 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 TOPORSQ9NS56 1045 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 WARS2Q9UGM6 360 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 DNAJC12Q9UKB3 198 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 MARK3P27448 753 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 DAB2P98082 770 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 OSBPL5Q9H0X9 879 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ZBTB5O15062 677 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 PDHA1P08559 390 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 SENP1Q9P0U3 644 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 OCM2P0CE71 109 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 OCMP0CE72 109 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 PRCPP42785 496 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ARHGAP27Q6ZUM4 889 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 NAF1Q96HR8 494 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 NR1H4Q96RI1 486 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 CITO14578 2027 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 UBE4BO95155 1302 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 DHX34Q14147 1143 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 MAPK6Q16659 721 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 PFKFB3Q16875 520 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 EXT2Q93063 718 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 TRIM62Q9BVG3 475 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 CCDC22O60826 627 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 KITP10721 976 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 TRIM45Q9H8W5 580 aaPredicted RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 CHCHD3Q9NX63 227 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 HACD3Q9P035 362 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 IREB2P48200 963 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 HNRNPH2P55795 449 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 HIPK4Q8NE63 616 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 STX18Q9P2W9 335 aaKnown RBP18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
NOTCH3-201ENST00000263388 ZBTB41Q5SVQ8 909 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 RNF219Q5W0B1 726 aaPredicted RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 LRRC31Q6UY01 552 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 STX19Q8N4C7 294 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 ATP11CQ8NB49 1132 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 PIGOQ8TEQ8 1089 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 ZC3H13Q5T200 1668 aaKnown RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 MYO1CO00159 1063 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 DDX5P17844 614 aaKnown RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 HLA-DPA1P20036 260 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 KNOP1Q1ED39 458 aaKnown RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 ZNF564Q8TBZ8 553 aaPredicted RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 E5RI56 91 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 PRKAB2O43741 272 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 PRELPP51888 382 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 CC2D1AQ6P1N0 951 aaPredicted RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 RGS9BPQ6ZS82 235 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 SZRD1Q7Z422 152 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 ELF1P32519 619 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 SLITRK6Q9H5Y7 841 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 ADA2Q9NZK5 511 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 DNAJC17Q9NVM6 304 aaKnown RBP18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 TMEM270Q6UE05 265 aa18.56■□□□□ 0.56
NOTCH3-201ENST00000263388 H0Y3Z8 333 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 PHKA2P46019 1235 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 C1orf228Q6PIY5 440 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 ZNF341Q9BYN7 854 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 KDM4CQ9H3R0 1056 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 CASZ1Q86V15 1759 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 LRRC53A6NM62 1247 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 DSTYKQ6XUX3 929 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 ARHGAP18Q8N392 663 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 OR6B3Q8NGW1 331 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 KDM1AO60341 852 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 ANP32DO95626 131 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 ICE2Q659A1 982 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 GOLGA8MH3BSY2 632 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 CTTNQ14247 550 aaKnown RBP18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 CNGA3Q16281 694 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 HEATR6Q6AI08 1181 aaKnown RBP18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 FAM20AQ96MK3 541 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 SKOR1P84550 965 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 G3BP2Q9UN86 482 aaKnown RBP18.55■□□□□ 0.56
NOTCH3-201ENST00000263388 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 VAMP7P51809 220 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 ECT2Q9H8V3 914 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 FAM187AA6NFU0 413 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 RECQLP46063 649 aaPredicted RBP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 ZC3H12BQ5HYM0 836 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms