RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SIX2Q9NPC8 291 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 FRMD4BQ9Y2L6 1034 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CCDC188H7C350 402 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 TGFB1I1O43294 461 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 CTNND1O60716 968 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 CAND2O75155 1236 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 NOVP48745 357 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 DR1Q01658 176 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 ELMO3Q96BJ8 720 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SUGT1Q9Y2Z0 365 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 HGSO14964 777 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SHBGP04278 402 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SOX5P35711 763 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 IRX3P78415 501 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SPIRE1Q08AE8 756 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 MESDQ14696 234 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 TMC3Q7Z5M5 1100 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 CCDC13Q8IYE1 715 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 ZKSCAN4Q969J2 545 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 ERVK-5Q9HDB9 667 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 GOLGA6L10A0A0M3HER8 536 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 H0YGN5 161 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 RDXP35241 583 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 MOB2Q70IA6 237 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 CACNA2D3Q8IZS8 1091 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 NFS1Q9Y697 457 aa15.66■□□□□ 0.1
SFSWAP-201ENST00000261674 MTMR3Q13615 1198 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 ACP6Q9NPH0 428 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 TISP43B9A030 160 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 FOXN3O00409 490 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 POTEJP0CG39 1038 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 FMO5P49326 533 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 SPRED3Q2MJR0 410 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 CCDC38Q502W7 563 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 FBXO25Q8TCJ0 367 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 SEC16BQ96JE7 1060 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 CALR3Q96L12 384 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 UBE2TQ9NPD8 197 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 NAV1Q8NEY1 1877 aa15.65■□□□□ 0.1
SFSWAP-201ENST00000261674 FRMD3A2A2Y4 597 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 F8VZ95 297 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 NDUFB10O96000 172 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 DPY19L2P1Q6NXN4 242 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 SLC20A1Q8WUM9 679 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 C18orf8Q96DM3 657 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 GLT8D2Q9H1C3 349 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 PARVGQ9HBI0 331 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 ADM5C9JUS6 153 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 FZD9O00144 591 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 PRKCIP41743 596 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 LRIG3Q6UXM1 1119 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 AGBL3Q8NEM8 1001 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 MGARPQ8TDB4 240 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 RFFLQ8WZ73 363 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 ALG3Q92685 438 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 LENG9Q96B70 501 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 CCDC17Q96LX7 622 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 DNAJC17Q9NVM6 304 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 GGT7Q9UJ14 662 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 DDX60LQ5H9U9 1706 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 VIMP08670 466 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 KCNJ1P48048 391 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 MARCKSL1P49006 195 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 BIRC3Q13489 604 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 FAM114A2Q9NRY5 505 aa15.64■□□□□ 0.09
SFSWAP-201ENST00000261674 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 GAS7O60861 476 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 CLSTN1O94985 981 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 EYA4O95677 639 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 FNTAP49354 379 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 GKAP1Q5VSY0 366 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 SYDE2Q5VT97 1194 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 FOXR2Q6PJQ5 311 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 SPATS2Q86XZ4 545 aaKnown RBP15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 KRT35Q92764 455 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 RAB17Q9H0T7 212 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 SLITRK6Q9H5Y7 841 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 HAUS2Q9NVX0 235 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 SLC12A6Q9UHW9 1150 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 ALG6Q9Y672 507 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 TRAPPC3O43617 180 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 FTLP02792 175 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 GCLMP48507 274 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 MYL7Q01449 175 aa15.63■□□□□ 0.09
SFSWAP-201ENST00000261674 MKRN3Q13064 507 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms