RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 P3H4Q92791 437 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 GRHL1Q9NZI5 618 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 C15orf41Q9Y2V0 281 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 CHMP2AO43633 222 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
LMNB1-201ENST00000261366 RARAP10276 462 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 NQO1P15559 274 aaKnown RBP17.16■□□□□ 0.34
LMNB1-201ENST00000261366 VPS41P49754 854 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 USH1GQ495M9 461 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 CBWD6Q4V339 395 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 CBWD3Q5JTY5 395 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 CBWD5Q5RIA9 395 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 CCDC137Q6PK04 289 aaKnown RBP17.16■□□□□ 0.34
LMNB1-201ENST00000261366 FAM186BQ8IYM0 893 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 PGM2Q96G03 612 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 RASAL2Q9UJF2 1139 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 COL5A3P25940 1745 aaPredicted RBP17.16■□□□□ 0.34
LMNB1-201ENST00000261366 MYBL1P10243 752 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 CNGA2Q16280 664 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 PRELID2Q8N945 189 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 SLC17A8Q8NDX2 589 aa17.16■□□□□ 0.34
LMNB1-201ENST00000261366 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
LMNB1-201ENST00000261366 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 SNX3O60493 162 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 NUDT17P0C025 328 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 EXOC3L1Q86VI1 746 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 CYP2W1Q8TAV3 490 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 CENPTQ96BT3 561 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 PAIP2Q9BPZ3 127 aaKnown RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 NSRP1Q9H0G5 558 aaKnown RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 TRAF3IP3Q9Y228 551 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 TMEM120BA0PK00 339 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 PPP4CP60510 307 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 ITIH4Q14624 930 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 ASPRV1Q53RT3 343 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 C6orf118Q5T5N4 469 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 TRIM68Q6AZZ1 485 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 PWWP2AQ96N64 755 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 ZNF570Q96NI8 536 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 MTRF1LQ9UGC7 380 aaKnown RBP17.15■□□□□ 0.34
LMNB1-201ENST00000261366 AFF2P51816 1311 aa17.15■□□□□ 0.34
LMNB1-201ENST00000261366 RIPK2O43353 540 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 ZNF543Q08ER8 600 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 MYCT1Q8N699 235 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.34
LMNB1-201ENST00000261366 ANO3Q9BYT9 981 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 CARD9Q9H257 536 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.34
LMNB1-201ENST00000261366 A0A0A6YYK5 440 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 CLGNO14967 610 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 VCAM1P19320 739 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 LMNB1P20700 586 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 PPATQ06203 517 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 FAM47EQ6ZV65 393 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 BZW1Q7L1Q6 419 aaKnown RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 ELMO3Q96BJ8 720 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 USP15Q9Y4E8 981 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 ENO4A6NNW6 628 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 FOXN3O00409 490 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 AGTP01019 485 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 TMEM253P0C7T8 217 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 RNASELQ05823 741 aaKnown RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 ADCY2Q08462 1091 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 NSMFQ6X4W1 530 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 SLC30A5Q8TAD4 765 aa17.14■□□□□ 0.33
LMNB1-201ENST00000261366 NAP1L3Q99457 506 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
LMNB1-201ENST00000261366 PDXKO00764 312 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 RTN2O75298 545 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 CLK2P49760 499 aaKnown RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 PDE6CP51160 858 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 C1orf54Q8WWF1 131 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 RMDN2Q96LZ7 410 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 ZBTB5O15062 677 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 PHF2O75151 1096 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 UFL1O94874 794 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 PYGMP11217 842 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 PTGIRP43119 386 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 RHBDL3P58872 404 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms