RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RARBP10826 455 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 POLR2CP19387 275 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 GNA11P29992 359 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 MLLT3P42568 568 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SEPHS1P49903 392 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 EMP3P54852 163 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 GNG11P61952 73 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 DSC3Q14574 896 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 RFTN1Q14699 578 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CLUL1Q15846 466 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 Q6ZNX1 250 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PROM2Q8N271 834 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 LZTR1Q8N653 840 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TTLQ8NG68 377 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 WDR24Q96S15 920 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 COQ7Q99807 217 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 WDR6Q9NNW5 1121 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PALMDQ9NP74 551 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 KCNMB3Q9NPA1 279 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 MRPS23Q9Y3D9 190 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SPEF1Q9Y4P9 236 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PCDHGA3Q9Y5H0 932 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 LMTK2Q8IWU2 1503 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PLEKHG1Q9ULL1 1385 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SYCE1LA8MT33 242 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 FDX1P10109 184 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PABPC1P11940 636 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ETS2P15036 469 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 HSPA6P17066 643 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TRIM23P36406 574 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PRCPP42785 496 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 C21orf58P58505 322 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 RAC1P63000 192 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TMF1P82094 1093 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PPP2R2BQ00005 443 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TTLL12Q14166 644 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 Q3ZCU0 254 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 FAM133BQ5BKY9 247 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SPECC1LQ69YQ0 1117 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 KLHL35Q6PF15 583 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SLC30A10Q6XR72 485 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PROSER2Q86WR7 435 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CEP70Q8NHQ1 597 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CALML6Q8TD86 181 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CCT6BQ92526 530 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 EFHD2Q96C19 240 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CNDP1Q96KN2 507 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 FAM167AQ96KS9 214 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PIP5K1AQ99755 562 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TSEN34Q9BSV6 310 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 IFT22Q9H7X7 185 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SELENONQ9NZV5 590 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CNTN3Q9P232 1028 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SOX13Q9UN79 622 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 DEPDC5O75140 1603 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC141Q6ZP82 1450 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 KRT75O95678 551 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 IL33O95760 270 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PRLP01236 227 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ALOX5P09917 674 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 M6PRP20645 277 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 IL10P22301 178 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TCEA1P23193 301 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PCYT1AP49585 367 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF135P52742 658 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 OLR1P78380 273 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 KRT85P78386 507 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ATP8B2P98198 1209 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SPDYAQ5MJ70 313 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 RUFY3Q7L099 469 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 MIGA2Q7L4E1 593 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 TBC1D1Q86TI0 1168 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 SPATA24Q86W54 205 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ARHGAP24Q8N264 748 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PIP4K2CQ8TBX8 421 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CAGE1Q8TC20 777 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 FAM136AQ96C01 138 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 AIFM3Q96NN9 605 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 MALT1Q9UDY8 824 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 HERC5Q9UII4 1024 aaKnown RBP8.28□□□□□ -1.08
GPNMB-201ENST00000258733 PCDHGA11Q9Y5H2 935 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 FER1L4A9Z1Z3 1794 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 KRIT1O00522 736 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 VWA5AO00534 786 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ST8SIA5O15466 376 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ADCY3O60266 1144 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ZC3H11AO75152 810 aaKnown RBP eCLIP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GMNNO75496 209 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 RGS20O76081 388 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms