RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 THPOP40225 353 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 NT5DC4Q86YG4 428 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TBC1D19Q8N5T2 526 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 ZKSCAN4Q969J2 545 aaPredicted RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 CFAP57Q96MR6 1250 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 ENTPD7Q9NQZ7 604 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 RNF14Q9UBS8 474 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 GAKO14976 1311 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 P4HA2O15460 535 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 PPIGQ13427 754 aaKnown RBP eCLIP14.42□□□□□ -0.14e-6■□□□□ 11.3
PRPF38A-201ENST00000257181 RASGRP4Q8TDF6 673 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 SH3BP1Q9Y3L3 701 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 ABCB4P21439 1286 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 PPM1AP35813 382 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 KCNH2Q12809 1159 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 PNOCQ13519 176 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 LINC00301Q8NCQ3 95 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 TUBGCP2Q9BSJ2 902 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 OXCT2Q9BYC2 517 aaPredicted RBP14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 HAUS4Q9H6D7 363 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 EVI5O60447 810 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 TTC23LQ6PF05 361 aa14.42□□□□□ -0.1
PRPF38A-201ENST00000257181 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 GEN1Q17RS7 908 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 KNOP1Q1ED39 458 aaKnown RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 RFX6Q8HWS3 928 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 USP13Q92995 863 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 CAPNS2Q96L46 248 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 ASCC2Q9H1I8 757 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 MAPK8IP1Q9UQF2 711 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 COL1A1P02452 1464 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 PDXKO00764 312 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 SERPINB6P35237 376 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 FAM110CQ1W6H9 321 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 SGO2Q562F6 1265 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 SLITRK1Q96PX8 696 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 UXTQ9UBK9 157 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 KIAA1257Q9ULG3 409 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 ESPNB1AK53 854 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 PPFIA4O75335 1185 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 FYB2Q5VWT5 728 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 TSC1Q92574 1164 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 PGBD1Q96JS3 809 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 TCP1P17987 556 aaKnown RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 MAP2K2P36507 400 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 PRKCEQ02156 737 aa14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 RBAKQ9NYW8 714 aaPredicted RBP14.41□□□□□ -0.1
PRPF38A-201ENST00000257181 MEIS1O00470 390 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 KRT33BQ14525 404 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CASC4Q6P4E1 433 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CYB5R4Q7L1T6 521 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 FAM207AQ9NSI2 230 aaPredicted RBP14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 GCNT4Q9P109 453 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 HSPA8P11142 646 aaKnown RBP14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 SNAP25P60880 206 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 C8orf74Q6P047 294 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 ANKS4BQ8N8V4 417 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 AFG1LQ8WV93 481 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CCSER1Q9C0I3 900 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 EFCAB12Q6NXP0 572 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CCDC170Q8IYT3 715 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 RBM41Q96IZ5 413 aaKnown RBP14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 ZMYND12Q9H0C1 365 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 TRPV2Q9Y5S1 764 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 CYP2C8P10632 490 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 JRKLQ9Y4A0 524 aa14.4□□□□□ -0.1
PRPF38A-201ENST00000257181 A8MXQ7 604 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 TCF7P36402 384 aaPredicted RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 TRMT1Q9NXH9 659 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 HYOU1Q9Y4L1 999 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 DUOX1Q9NRD9 1551 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 ADM5C9JUS6 153 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 NR3C1P04150 777 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 SERPING1P05155 500 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 EPHB3P54753 998 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 TDRD10Q5VZ19 366 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 FRMD5Q7Z6J6 570 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 GDAQ9Y2T3 454 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 MRC1P22897 1456 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 H3BRJ5 948 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 H7C0C1 242 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 ATP5OP48047 213 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 TAF6P49848 677 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 DNAJC21Q5F1R6 531 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 GUF1Q8N442 669 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms