RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 SFR1Q86XK3 245 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 MYCT1Q8N699 235 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 TMEM161BQ8NDZ6 487 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 PRIMPOLQ96LW4 560 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 GSDMAQ96QA5 445 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 FZD8Q9H461 694 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 TMEM134Q9H6X4 195 aa15.57■□□□□ 0.08
VPS25-201ENST00000253794 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
VPS25-201ENST00000253794 LRRIQ4A6NIV6 560 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
VPS25-201ENST00000253794 IDEP14735 1019 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 CCL23P55773 120 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 GTF2BQ00403 316 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 PSMD2Q13200 908 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 PNOCQ13519 176 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 ALCAMQ13740 583 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 AMHR2Q16671 573 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 KLHL40Q2TBA0 621 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 PLEKHG4Q58EX7 1191 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 HERC4Q5GLZ8 1057 aaPredicted RBP15.56■□□□□ 0.08
VPS25-201ENST00000253794 ZNF720Q7Z2F6 126 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 FAM228AQ86W67 206 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 ZBTB8OSQ8IWT0 167 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 FAM178BQ8IXR5 827 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 DEPTORQ8TB45 409 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 HVCN1Q96D96 273 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 MINDY3Q9H8M7 445 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
VPS25-201ENST00000253794 NOC2LQ9Y3T9 749 aaKnown RBP15.56■□□□□ 0.08
VPS25-201ENST00000253794 RPS6KA5O75582 802 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 SMC2O95347 1197 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS25-201ENST00000253794 FAM26FQ5R3K3 315 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 RBM43Q6ZSC3 357 aaKnown RBP15.55■□□□□ 0.08
VPS25-201ENST00000253794 EPM2AIP1Q7L775 607 aaPredicted RBP15.55■□□□□ 0.08
VPS25-201ENST00000253794 TAS1R3Q7RTX0 852 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 HAUS6Q7Z4H7 955 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 APBB2Q92870 758 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 SCLYQ96I15 445 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 PPP1R16BQ96T49 567 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 GTPBP4Q9BZE4 634 aaKnown RBP15.55■□□□□ 0.08
VPS25-201ENST00000253794 NUP62CLQ9H1M0 184 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 AGO3Q9H9G7 860 aaKnown RBP15.55■□□□□ 0.08
VPS25-201ENST00000253794 ERVK-5Q9HDB9 667 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 PRMT7Q9NVM4 692 aaPredicted RBP15.55■□□□□ 0.08
VPS25-201ENST00000253794 PCDHA5Q9Y5H7 936 aa15.55■□□□□ 0.08
VPS25-201ENST00000253794 CCDC169A6NNP5 214 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 GPR182O15218 404 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 SLC16A4O15374 487 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 GHRP10912 638 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 FPGSQ05932 587 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 PPIGQ13427 754 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■□□□□ 10.9
VPS25-201ENST00000253794 KMT5BQ4FZB7 885 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 MAP4K3Q8IVH8 894 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
VPS25-201ENST00000253794 BADQ92934 168 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 SMARCE1Q969G3 411 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 CCDC47Q96A33 483 aaKnown RBP15.54■□□□□ 0.08
VPS25-201ENST00000253794 ZNF668Q96K58 619 aaPredicted RBP15.54■□□□□ 0.08
VPS25-201ENST00000253794 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 ZHX3Q9H4I2 956 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 IL23AQ9NPF7 189 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 CHST12Q9NRB3 414 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 EXOC1Q9NV70 894 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 RMND1Q9NWS8 449 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 KIAA1468Q9P260 1216 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 ZMYND8Q9ULU4 1186 aaPredicted RBP15.54■□□□□ 0.08
VPS25-201ENST00000253794 PADI3Q9ULW8 664 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 GINS2Q9Y248 185 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 MYH11P35749 1972 aa15.54■□□□□ 0.08
VPS25-201ENST00000253794 UBE4BO95155 1302 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 CNTNAP2Q9UHC6 1331 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 DENND3A2RUS2 1198 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 INO80B-WBP1J3KQ70 363 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 K7ENM7 598 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 K7ERI5 159 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 ACKR2O00590 384 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 EIF3DO15371 548 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS25-201ENST00000253794 PIGRP01833 764 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 CSF2RAP15509 400 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 NMT1P30419 496 aaKnown RBP15.53■□□□□ 0.08
VPS25-201ENST00000253794 AXLP30530 894 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 CD52P31358 61 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 PAK2Q13177 524 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 NFKBIBQ15653 356 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 MAPK6Q16659 721 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 BMT2Q1RMZ1 405 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 SKOR2Q2VWA4 1001 aaPredicted RBP15.53■□□□□ 0.08
VPS25-201ENST00000253794 CNKSR3Q6P9H4 555 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 TRAIPQ9BWF2 469 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 FTHL17Q9BXU8 183 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 IFIH1Q9BYX4 1025 aaKnown RBP15.53■□□□□ 0.08
VPS25-201ENST00000253794 MRPL44Q9H9J2 332 aaKnown RBP15.53■□□□□ 0.08
VPS25-201ENST00000253794 AGPAT5Q9NUQ2 364 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 ST3GAL5Q9UNP4 418 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms