RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 C1orf186Q6ZWK4 172 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 ZNF598Q86UK7 904 aaKnown RBP15.78■□□□□ 0.12
CNN1-201ENST00000252456 ECHDC2Q86YB7 292 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 ARNTL2Q8WYA1 636 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 EPSTI1Q96J88 318 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 TGS1Q96RS0 853 aaKnown RBP15.78■□□□□ 0.12
CNN1-201ENST00000252456 C17orf80Q9BSJ5 609 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 CCSER1Q9C0I3 900 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 ELAC1Q9H777 363 aaKnown RBP15.78■□□□□ 0.12
CNN1-201ENST00000252456 BLOC1S4Q9NUP1 217 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 TMEM161AQ9NX61 479 aa15.78■□□□□ 0.12
CNN1-201ENST00000252456 TFIP11Q9UBB9 837 aaKnown RBP15.78■□□□□ 0.12
CNN1-201ENST00000252456 ATG2AQ2TAZ0 1938 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 A0A0U1RQF3 1178 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 TSPAN1O60635 241 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 LPXNO60711 386 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 BRD1O95696 1058 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 STAG3L1P0CL83 205 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 PLCG1P19174 1290 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 IBSPP21815 317 aaPredicted RBP15.77■□□□□ 0.12
CNN1-201ENST00000252456 SYT2Q8N9I0 419 aaPredicted RBP15.77■□□□□ 0.12
CNN1-201ENST00000252456 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 PCDHB7Q9Y5E2 793 aa15.77■□□□□ 0.12
CNN1-201ENST00000252456 PRRC2BQ5JSZ5 2229 aaKnown RBP15.77■□□□□ 0.11
CNN1-201ENST00000252456 LRRIQ4A6NIV6 560 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 FGFR1P11362 822 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 SYMPKQ92797 1274 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 CLP1Q92989 425 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 XIRP2A4UGR9 3374 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 EDN1P05305 212 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 FOSL2P15408 326 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 NAMPTP43490 491 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 BTG3Q14201 252 aaPredicted RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 PCBP1Q15365 356 aaKnown RBP eCLIP15.76■□□□□ 0.11
CNN1-201ENST00000252456 PAN2Q504Q3 1202 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 ARSHQ5FYA8 562 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 CLLU1OSQ5K130 101 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 TWF2Q6IBS0 349 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 FIBCD1Q8N539 461 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 KIFAP3Q92845 792 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 KIFC3Q9BVG8 833 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 CCDC113Q9H0I3 377 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 LRFN2Q9ULH4 789 aa15.76■□□□□ 0.11
CNN1-201ENST00000252456 MRPL42Q9Y6G3 142 aaKnown RBP15.76■□□□□ 0.11
CNN1-201ENST00000252456 TCHHQ07283 1943 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 SPTBN5Q9NRC6 3674 aaKnown RBP15.75■□□□□ 0.11
CNN1-201ENST00000252456 MEIS3P2A8K0S8 358 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 B4GALT5O43286 388 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 HIP1RO75146 1068 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 YEATS4O95619 227 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 STK38Q15208 465 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 EPC2Q52LR7 807 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 FZD8Q9H461 694 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 FAM105AQ9NUU6 356 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 HCSTQ9UBK5 93 aa15.75■□□□□ 0.11
CNN1-201ENST00000252456 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 SPTLC2O15270 562 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 ZNF623O75123 536 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 PPP6R2O75170 966 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 ERLIN2O94905 339 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 EOMESO95936 686 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 SSBP05455 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
CNN1-201ENST00000252456 ARF4P18085 180 aaPredicted RBP15.74■□□□□ 0.11
CNN1-201ENST00000252456 DNM1Q05193 864 aaKnown RBP15.74■□□□□ 0.11
CNN1-201ENST00000252456 RAD51AP2Q09MP3 1159 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 BECN1Q14457 450 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 NAALADL2Q58DX5 795 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 TMEM192Q8IY95 271 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 GDPD5Q8WTR4 605 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 RAD54LQ92698 747 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 CPB2Q96IY4 423 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 CHAMP1Q96JM3 812 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 CASD1Q96PB1 797 aa15.74■□□□□ 0.11
CNN1-201ENST00000252456 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
CNN1-201ENST00000252456 PLXNA4Q9HCM2 1894 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 A0A087X0B3 334 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 POU3F3P20264 500 aaPredicted RBP15.73■□□□□ 0.11
CNN1-201ENST00000252456 PPP2R5AQ15172 486 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 LPPQ93052 612 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 GAS2L1Q99501 681 aaPredicted RBP15.73■□□□□ 0.11
CNN1-201ENST00000252456 TMEM117Q9H0C3 514 aa15.73■□□□□ 0.11
CNN1-201ENST00000252456 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
CNN1-201ENST00000252456 KCND2Q9NZV8 630 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms