RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PPM1AP35813 382 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 MOXD1Q6UVY6 613 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 EDAQ92838 391 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 PHF7Q9BWX1 381 aaPredicted RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 TM6SF1Q9BZW5 370 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 NRBP2Q9NSY0 501 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 USP34Q70CQ2 3546 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 PER2O15055 1255 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 CHMP2AO43633 222 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 DEXIO95424 95 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 PBX3P40426 434 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 TBC1D8BQ0IIM8 1120 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 XKR3Q5GH77 459 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 SPOUT1Q5T280 376 aaKnown RBP11.61□□□□□ -0.55
VPS50-201ENST00000251739 SYCE2Q6PIF2 218 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 BMP8AQ7Z5Y6 402 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
VPS50-201ENST00000251739 ZNF668Q96K58 619 aaPredicted RBP11.61□□□□□ -0.55
VPS50-201ENST00000251739 ZNF558Q96NG5 402 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 S1PR5Q9H228 398 aa11.61□□□□□ -0.55
VPS50-201ENST00000251739 C2orf16Q68DN1 1984 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 EOMESO95936 686 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 FGFR4P22455 802 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 NLRP5P59047 1200 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 PLPP4Q5VZY2 271 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 ANO5Q75V66 913 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 BLIDQ8IZY5 108 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 RSPH1Q8WYR4 309 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 FBXL18Q96ME1 805 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 TCF25Q9BQ70 676 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 NGRNQ9NPE2 291 aaKnown RBP11.6□□□□□ -0.55
VPS50-201ENST00000251739 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 VAV3Q9UKW4 847 aa11.6□□□□□ -0.55
VPS50-201ENST00000251739 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 SLC37A4O43826 429 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 CSDE1O75534 798 aaKnown RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 PHKA2P46019 1235 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 ZXDAP98168 799 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 CDC42EP1Q00587 391 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 NHLH1Q02575 133 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 MTERF2Q49AM1 385 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 GALNT17Q6IS24 598 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 ANKRD54Q6NXT1 300 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 ZNF410Q86VK4 478 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 HELQQ8TDG4 1101 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 MICAL1Q8TDZ2 1067 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 MRPL9Q9BYD2 267 aaKnown RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 KCNMB3Q9NPA1 279 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 ENTPD7Q9NQZ7 604 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 CHST12Q9NRB3 414 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 SPG21Q9NZD8 308 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 CYP46A1Q9Y6A2 500 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 RIF1Q5UIP0 2472 aaKnown RBP11.59□□□□□ -0.55
VPS50-201ENST00000251739 STK36Q9NRP7 1315 aa11.59□□□□□ -0.55
VPS50-201ENST00000251739 MYO15AQ9UKN7 3530 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 SPTBN4Q9H254 2564 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 A0A087WZ62 844 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 TMEM221A6NGB7 291 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 C2orf71A6NGG8 1288 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 M0R296 226 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 EML1O00423 815 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 NONOQ15233 471 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS50-201ENST00000251739 KRT25Q7Z3Z0 450 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 TMEM173Q86WV6 379 aaPredicted RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 ABI1Q8IZP0 508 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 SH2D3AQ9BRG2 576 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 PHF20Q9BVI0 1012 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 GCOM2Q9BZD3 368 aaPredicted RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 PUF60Q9UHX1 559 aaKnown RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 IRAK3Q9Y616 596 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 WDR87Q6ZQQ6 2873 aa11.58□□□□□ -0.56
VPS50-201ENST00000251739 TDRD15B5MCY1 1934 aaKnown RBP11.58□□□□□ -0.56
VPS50-201ENST00000251739 DMDP11532 3685 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms