RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SCFD1Q8WVM8 642 aa18.43■□□□□ 0.54
FOXA1-201ENST00000250448 LRRC45Q96CN5 670 aa18.43■□□□□ 0.54
FOXA1-201ENST00000250448 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
FOXA1-201ENST00000250448 CENPHQ9H3R5 247 aa18.43■□□□□ 0.54
FOXA1-201ENST00000250448 GEMIN8Q9NWZ8 242 aaKnown RBP18.43■□□□□ 0.54
FOXA1-201ENST00000250448 GGA2Q9UJY4 613 aa18.43■□□□□ 0.54
FOXA1-201ENST00000250448 CEP104O60308 925 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 PTK2Q05397 1052 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 UAP1Q16222 522 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 WDR90Q96KV7 1748 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 MYCLP12524 364 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 ITGB5P18084 799 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 KCNH2Q12809 1159 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 IFI16Q16666 785 aaKnown RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 RNF187Q5TA31 235 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 RNF207Q6ZRF8 634 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 ZNF571Q7Z3V5 609 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 GPBP1Q86WP2 473 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
FOXA1-201ENST00000250448 NCAPGQ9BPX3 1015 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 WDR11Q9BZH6 1224 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 RGL1Q9NZL6 768 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 VAV3Q9UKW4 847 aa18.42■□□□□ 0.54
FOXA1-201ENST00000250448 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 BHMG1C9JSJ3 638 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-201ENST00000250448 H0YGN5 161 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 PLA2G4BP0C869 781 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 PSMC6P62333 389 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 ADAM9Q13443 819 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 HERC4Q5GLZ8 1057 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-201ENST00000250448 MCF2L2Q86YR7 1114 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 ANKRD13AQ8IZ07 590 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 LRRC57Q8N9N7 239 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 CALR3Q96L12 384 aaKnown RBP18.41■□□□□ 0.54
FOXA1-201ENST00000250448 NFS1Q9Y697 457 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 PTPRFP10586 1907 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 IQCA1LA6NCM1 817 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
FOXA1-201ENST00000250448 ACTN1P12814 892 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
FOXA1-201ENST00000250448 EDRF1Q3B7T1 1238 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 CCDC91Q7Z6B0 441 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 CATSPER3Q86XQ3 398 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 OR2W6PQ8NHA6 318 aa18.41■□□□□ 0.54
FOXA1-201ENST00000250448 CETN3O15182 167 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 LRCH2Q5VUJ6 765 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 IRF2BP2Q7Z5L9 587 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 DDX42Q86XP3 938 aaKnown RBP eCLIP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 ZNF526Q8TF50 670 aaPredicted RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 SPAG5Q96R06 1193 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 CTNNA1P35221 906 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 RBM46Q8TBY0 533 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 OPTNQ96CV9 577 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 CYFIP2Q96F07 1278 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 NEUROG2Q9H2A3 272 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 R3HDMLQ9H3Y0 253 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 PPANQ9NQ55 473 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 CYP11B2P19099 503 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 IFT88Q13099 833 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 BIRC3Q13489 604 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 FAM20AQ96MK3 541 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.4■□□□□ 0.545e-24■■□□□ 13.3
FOXA1-201ENST00000250448 ZNF577Q9BSK1 485 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 AP1M1Q9BXS5 423 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 SLC12A6Q9UHW9 1150 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 ADAMTS5Q9UNA0 930 aa18.4■□□□□ 0.54
FOXA1-201ENST00000250448 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
FOXA1-201ENST00000250448 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-201ENST00000250448 NR2F2P24468 414 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 ACTN3Q08043 901 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-201ENST00000250448 PTPROQ16827 1216 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 DPY19L2P1Q6NXN4 242 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 ERO1BQ86YB8 467 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 METTL13Q8N6R0 699 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 MYCBPQ99417 103 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-201ENST00000250448 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 PAPPA2Q9BXP8 1791 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 TBX3O15119 743 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 SART1O43290 800 aaKnown RBP18.39■□□□□ 0.53
FOXA1-201ENST00000250448 SPATA31C1P0DKV0 1188 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 SLC9A1P19634 815 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 CTTNQ14247 550 aaKnown RBP18.39■□□□□ 0.53
FOXA1-201ENST00000250448 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 C6orf89Q6UWU4 347 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 MXRA8Q9BRK3 442 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 DDX47Q9H0S4 455 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms