RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FOXN3O00409 490 aaPredicted RBP23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 CAP2P40123 477 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 POU5F1Q01860 360 aaKnown RBP23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 CEP85LQ5SZL2 805 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 DCAF12L1Q5VU92 463 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 RDH13Q8NBN7 331 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 TAS2R14Q9NYV8 317 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 DBR1Q9UK59 544 aaKnown RBP23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 NFS1Q9Y697 457 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 EBAG9O00559 213 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 P4HA2O15460 535 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 FGGP02679 453 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 ICAM1P05362 532 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 GRIPAP1Q4V328 841 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 FKBP1CQ5VVH2 108 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 PALB2Q86YC2 1186 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 PROCA1Q8NCQ7 364 aaPredicted RBP23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 AGPAT1Q99943 283 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 GLIS2Q9BZE0 524 aaPredicted RBP23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 THAP2Q9H0W7 228 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 CARD9Q9H257 536 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 KCNH7Q9NS40 1196 aa23.43■■□□□ 1.34
SH2D3A-201ENST00000245908 EMSYQ7Z589 1322 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 DHX15O43143 795 aaKnown RBP23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 TTI1O43156 1089 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 HADHBP55084 474 aaKnown RBP23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 DLG4P78352 724 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 SWT1Q5T5J6 900 aaKnown RBP23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 CDAN1Q8IWY9 1227 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 AGBL1Q96MI9 1066 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 ACCSQ96QU6 501 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 COL20A1Q9P218 1284 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 CCPG1Q9ULG6 757 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 ZNF536O15090 1300 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 A0A087WUV0 522 aaPredicted RBP23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 DAPK3O43293 454 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 C21orf2O43822 256 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 ZEB2O60315 1214 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 MTMR3Q13615 1198 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 TNIP1Q15025 636 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 SKIDA1Q1XH10 827 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 FAM114A2Q9NRY5 505 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 ZHX2Q9Y6X8 837 aa23.42■■□□□ 1.34
SH2D3A-201ENST00000245908 GOLGA6L10A6NI86 522 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 LRRN2O75325 713 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 VAMP7P51809 220 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 ITGB3BPQ13352 177 aaPredicted RBP23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 EPC2Q52LR7 807 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 MMS22LQ6ZRQ5 1243 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 TADA2BQ86TJ2 420 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 RHOT2Q8IXI1 618 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 TMEM39BQ9GZU3 492 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 PCIF1Q9H4Z3 704 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 VEZTQ9HBM0 779 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 SEPT11Q9NVA2 429 aaKnown RBP23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 COG5Q9UP83 839 aa23.41■■□□□ 1.34
SH2D3A-201ENST00000245908 RAD17O75943 681 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 RARRES1P49788 294 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 PTENP60484 403 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 CETN1Q12798 172 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 TCEAL1Q15170 157 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 MAEAQ7L5Y9 396 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 ARHGEF19Q8IW93 802 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 OGFOD1Q8N543 542 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 IL31RAQ8NI17 732 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 NAP1L3Q99457 506 aaPredicted RBP23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 UBE2TQ9NPD8 197 aaPredicted RBP23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 PKD2L1Q9P0L9 805 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 UTP11Q9Y3A2 253 aaKnown RBP23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 TISP43B9A030 160 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 LYPLA2O95372 231 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 PLS3P13797 630 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 GHRHRQ02643 423 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 PPP3CAQ08209 521 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 PPP2R5EQ16537 467 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 MIGA2Q7L4E1 593 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 CLEC4DQ8WXI8 215 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 CELF4Q9BZC1 486 aaKnown RBP23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 RABEP2Q9H5N1 569 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 AGO4Q9HCK5 861 aaKnown RBP23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 UBIAD1Q9Y5Z9 338 aa23.4■■□□□ 1.34
SH2D3A-201ENST00000245908 ANKRD65E5RJM6 399 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 MAPK13O15264 365 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 INPP5BP32019 993 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 LSP1P33241 339 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 CTNNA1P35221 906 aaKnown RBP23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 TKFCQ3LXA3 575 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 C1orf220Q5T0J3 134 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 SLC20A1Q8WUM9 679 aa23.39■■□□□ 1.34
SH2D3A-201ENST00000245908 NFIBO00712 420 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 MYZAPP0CAP1 466 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 FLT3P36888 993 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 ZNF844Q08AG5 666 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 CLUL1Q15846 466 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 TMC3Q7Z5M5 1100 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 FAM83AQ86UY5 434 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 CBWD1Q9BRT8 395 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 ST6GALNAC4Q9H4F1 302 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 NR2E1Q9Y466 385 aa23.39■■□□□ 1.33
SH2D3A-201ENST00000245908 PFASO15067 1338 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms