RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SPTLC3Q9NUV7 552 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 INTS13Q9NVM9 706 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 MAPK8IP1Q9UQF2 711 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 DAAM1Q9Y4D1 1078 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 CDH23Q9H251 3354 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 TRIM49BA6NDI0 452 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 GAS2O43903 313 aaKnown RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 STX10O60499 249 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 B4GALT4O60513 344 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 CSF2RAP15509 400 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 CYP2C18P33260 490 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 SMTNP53814 917 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 PMS1P54277 932 aaKnown RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 SMAD3P84022 425 aaKnown RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 RASIP1Q5U651 963 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 SLC9A9Q8IVB4 645 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 SCFD2Q8WU76 684 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 SPIRE2Q8WWL2 714 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 PPP1R12CQ9BZL4 782 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 EDEM3Q9BZQ6 932 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 TRPV6Q9H1D0 765 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 TTYH1Q9H313 450 aaPredicted RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 STXBP5LQ9Y2K9 1186 aa14.5□□□□□ -0.09
SLIRP-201ENST00000238688 MAFBQ9Y5Q3 323 aaPredicted RBP14.5□□□□□ -0.09
SLIRP-201ENST00000238688 A6NJR5 290 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 KIF2AO00139 706 aaPredicted RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 DDX39AO00148 427 aaKnown RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 ARHGAP6O43182 974 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 ZEB2O60315 1214 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 PLS3P13797 630 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 MTIF2P46199 727 aaKnown RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 ENPEPQ07075 957 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 ODR4Q5SWX8 454 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 ZNF720Q7Z2F6 126 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 FRMD5Q7Z6J6 570 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 C12orf56Q8IXR9 622 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 RNPC3Q96LT9 517 aaKnown RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 NOC4LQ9BVI4 516 aaKnown RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 STRA6Q9BX79 667 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 KCNF1Q9H3M0 494 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 WRAP73Q9P2S5 460 aaPredicted RBP14.49□□□□□ -0.09
SLIRP-201ENST00000238688 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
SLIRP-201ENST00000238688 A0A1W2PQJ5 194 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 GOLGA6L9A6NEM1 432 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 AKR1B15C9JRZ8 316 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 NKRFO15226 690 aaKnown RBP eCLIP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 MAPK13O15264 365 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 TLR3O15455 904 aaKnown RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 PPP1R37O75864 691 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 GCNT3O95395 438 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 ACRP10323 421 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 TXNP10599 105 aaKnown RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 SKILP12757 684 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 UBA1P22314 1058 aaKnown RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 FECHP22830 423 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 RFC5P40937 340 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 UBXN1Q04323 297 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 TTLL4Q14679 1199 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 PPP1R13LQ8WUF5 828 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 SEPT1Q8WYJ6 367 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 EMID1Q96A84 441 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 FAM161BQ96MY7 647 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 JPH2Q9BR39 696 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 NTPCRQ9BSD7 190 aaKnown RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 NIFKQ9BYG3 293 aaKnown RBP14.48□□□□□ -0.09
SLIRP-201ENST00000238688 SEZ6LQ9BYH1 1024 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 WNT8AQ9H1J5 351 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 TMX1Q9H3N1 280 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 ZHX3Q9H4I2 956 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 NRBP2Q9NSY0 501 aa14.48□□□□□ -0.09
SLIRP-201ENST00000238688 EMSYQ7Z589 1322 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 TANC1Q9C0D5 1861 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 HIP1RO75146 1068 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 MYL3P08590 195 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 CPT1AP50416 773 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 CCZ1BP86790 482 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 CCZ1P86791 482 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ARHGAP1Q07960 439 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 MAPK7Q13164 816 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ARID5BQ14865 1188 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 PPP2R5AQ15172 486 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 XKR9Q5GH70 373 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 UIMC1Q96RL1 719 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 MTG1Q9BT17 334 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 GBP3Q9H0R5 595 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 NUCKS1Q9H1E3 243 aaKnown RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ATP6V0A4Q9HBG4 840 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 ZNF302Q9NR11 478 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 PKD2L1Q9P0L9 805 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms