RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 APEX2Q9UBZ4 518 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 TLDC2A0PJX2 215 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 TESPA1A2RU30 521 aaPredicted RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 CYP26A1O43174 497 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 ZBTB48P10074 688 aaPredicted RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 KRT13P13646 458 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 CAP2P40123 477 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 MRPS9P82933 396 aaKnown RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 LMBRD2Q68DH5 695 aaPredicted RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 CBWD2Q8IUF1 395 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 RPUSD2Q8IZ73 545 aaKnown RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 FAM151AQ8WW52 585 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 DHX38Q92620 1227 aaKnown RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 PBKQ96KB5 322 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 RANBP17Q9H2T7 1088 aaKnown RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 STXBP5LQ9Y2K9 1186 aa9.91□□□□□ -0.82
SYDE2-201ENST00000234668 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
SYDE2-201ENST00000234668 TCRBV7S2A1N4TA0A589 114 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 ANKRD63C9JTQ0 380 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 NR1D1P20393 614 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 KCNJ1P48048 391 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 DAB2IPQ5VWQ8 1189 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 LLGL2Q6P1M3 1020 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 ARHGAP27Q6ZUM4 889 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 PCDHB18PQ96TA0 734 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 PI4K2AQ9BTU6 479 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 ISCUQ9H1K1 167 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 DMAC2Q9NW81 257 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 PTPN22Q9Y2R2 807 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 CNTNAP1P78357 1384 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 EBAG9O00559 213 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 CLSTN1O94985 981 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 VAMP7P51809 220 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 PLTPP55058 493 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.82
SYDE2-201ENST00000234668 STYK1Q6J9G0 422 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 SLC47A2Q86VL8 602 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 LMO3Q8TAP4 145 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
SYDE2-201ENST00000234668 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
SYDE2-201ENST00000234668 FAM169AQ9Y6X4 670 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 MYH11P35749 1972 aa9.9□□□□□ -0.82
SYDE2-201ENST00000234668 EIF3DO15371 548 aaKnown RBP eCLIP9.9□□□□□ -0.83
SYDE2-201ENST00000234668 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.83
SYDE2-201ENST00000234668 PEX10O60683 326 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 SHOX2O60902 331 aaPredicted RBP9.9□□□□□ -0.83
SYDE2-201ENST00000234668 ADRB2P07550 413 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 DLATP10515 647 aaKnown RBP9.9□□□□□ -0.83
SYDE2-201ENST00000234668 RARRES1P49788 294 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 XKR9Q5GH70 373 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 C10orf76Q5T2E6 689 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 ZDHHC14Q8IZN3 488 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 MDM1Q8TC05 714 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 SEMA4DQ92854 862 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 C18orf8Q96DM3 657 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 HES6Q96HZ4 224 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 AGPAT1Q99943 283 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 HSPBP1Q9NZL4 362 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.83
SYDE2-201ENST00000234668 ZNF536O15090 1300 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 FRMPD4Q14CM0 1322 aa9.9□□□□□ -0.83
SYDE2-201ENST00000234668 DHX15O43143 795 aaKnown RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 LSP1P33241 339 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 RPS6P62753 249 aaKnown RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 TKFCQ3LXA3 575 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 C1orf220Q5T0J3 134 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 SLFN11Q7Z7L1 901 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 RFFLQ8WZ73 363 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 SUCLA2Q9P2R7 463 aaPredicted RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 NENFQ9UMX5 172 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 ATRNL1Q5VV63 1379 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 E7EVH7 732 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 MYO1FO00160 1098 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 SHBGP04278 402 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 MMEP08473 750 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 LMNB1P20700 586 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 YWHABP31946 246 aaKnown RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 ZNF131P52739 623 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 MTMR1Q13613 665 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 RASA3Q14644 834 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 ATP6V1G3Q96LB4 118 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 TRIM7Q9C029 511 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 LARSQ9P2J5 1176 aaKnown RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 CNOT8Q9UFF9 292 aaKnown RBP9.89□□□□□ -0.83
SYDE2-201ENST00000234668 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
SYDE2-201ENST00000234668 COL11A2P13942 1736 aaPredicted RBP9.88□□□□□ -0.83
SYDE2-201ENST00000234668 NRXN2Q9P2S2 1712 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms