RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 SPATA31C1P0DKV0 1188 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 COL9A1P20849 921 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 TXKP42681 527 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 COASYQ13057 564 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 TRIM29Q14134 588 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 DUSP6Q16828 381 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 PDE12Q6L8Q7 609 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 CATSPER4Q7RTX7 472 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 ADHFE1Q8IWW8 467 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 EXOC8Q8IYI6 725 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 ABI1Q8IZP0 508 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 SLC39A11Q8N1S5 342 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 PSPC1Q8WXF1 523 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 C1QTNF1Q9BXJ1 281 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 TLE6Q9H808 572 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 SPG21Q9NZD8 308 aa16.63■□□□□ 0.25
GATC-201ENST00000229384 PIN4Q9Y237 131 aaKnown RBP16.63■□□□□ 0.25
GATC-201ENST00000229384 POTEMA6NI47 508 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 B4GALT3O60512 393 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 OFD1O75665 1012 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 ARL2P36404 184 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 NDUFV1P49821 464 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 PTENP60484 403 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 AGMOQ6ZNB7 445 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 MRPL10Q7Z7H8 261 aaKnown RBP16.62■□□□□ 0.25
GATC-201ENST00000229384 SMRP1Q8NCR6 262 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 FBXO18Q8NFZ0 1043 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 MICAL1Q8TDZ2 1067 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 TCP11Q8WWU5 503 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 PPP2R3CQ969Q6 453 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 MTRQ99707 1265 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 LRFN3Q9BTN0 628 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 BARX2Q9UMQ3 279 aaPredicted RBP16.62■□□□□ 0.25
GATC-201ENST00000229384 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
GATC-201ENST00000229384 HIDE1A8MVS5 230 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 ASAP2O43150 1006 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 MCM7P33993 719 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 RARRES1P49788 294 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 BCAR1P56945 870 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 TMEM173Q86WV6 379 aaPredicted RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 ASAP3Q8TDY4 903 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 MRPL9Q9BYD2 267 aaKnown RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
GATC-201ENST00000229384 NRDE2Q9H7Z3 1164 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 TBC1D13Q9NVG8 400 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 FAM50BQ9Y247 325 aa16.61■□□□□ 0.25
GATC-201ENST00000229384 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 GPR37L1O60883 481 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 MED24O75448 989 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 SKIP12755 728 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
GATC-201ENST00000229384 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 SSTR3P32745 418 aaPredicted RBP16.6■□□□□ 0.25
GATC-201ENST00000229384 PPM1AP35813 382 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 RAB27AP51159 221 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
GATC-201ENST00000229384 PLPP4Q5VZY2 271 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 C4orf32Q8N8J7 132 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 BCL7CQ8WUZ0 217 aaPredicted RBP16.6■□□□□ 0.25
GATC-201ENST00000229384 CDCA3Q99618 268 aaPredicted RBP16.6■□□□□ 0.25
GATC-201ENST00000229384 TCF25Q9BQ70 676 aa16.6■□□□□ 0.25
GATC-201ENST00000229384 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
GATC-201ENST00000229384 TSPAN1O60635 241 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 DGAT1O75907 488 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 GALTP07902 379 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 GLRA2P23416 452 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
GATC-201ENST00000229384 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 CAPSQ13938 189 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 MXD4Q14582 209 aaPredicted RBP16.59■□□□□ 0.25
GATC-201ENST00000229384 ZNF174Q15697 407 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 AMHR2Q16671 573 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 NOMO2Q5JPE7 1267 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
GATC-201ENST00000229384 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 NGRNQ9NPE2 291 aaKnown RBP16.59■□□□□ 0.25
GATC-201ENST00000229384 DNAJB4Q9UDY4 337 aa16.59■□□□□ 0.25
GATC-201ENST00000229384 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
GATC-201ENST00000229384 FAM86C2PA6NEL3 165 aa16.58■□□□□ 0.24
GATC-201ENST00000229384 DDHD2O94830 711 aa16.58■□□□□ 0.24
GATC-201ENST00000229384 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
GATC-201ENST00000229384 TOB1P50616 345 aaPredicted RBP16.58■□□□□ 0.24
GATC-201ENST00000229384 KRT17Q04695 432 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms