RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ZKSCAN4Q969J2 545 aaPredicted RBP18.92■□□□□ 0.62
PRPF19-201ENST00000227524 CENPTQ96BT3 561 aa18.92■□□□□ 0.62
PRPF19-201ENST00000227524 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
PRPF19-201ENST00000227524 NAP1L3Q99457 506 aaPredicted RBP18.92■□□□□ 0.62
PRPF19-201ENST00000227524 JPH2Q9BR39 696 aaPredicted RBP18.92■□□□□ 0.62
PRPF19-201ENST00000227524 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
PRPF19-201ENST00000227524 GPR88Q9GZN0 384 aa18.92■□□□□ 0.62
PRPF19-201ENST00000227524 FAM187AA6NFU0 413 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 MSH4O15457 936 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 SHBGP04278 402 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 POLD1P28340 1107 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 NFIL3Q16649 462 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 ERMARDQ5T6L9 678 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 CPLX4Q7Z7G2 160 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 MDM1Q8TC05 714 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 EIF2AK1Q9BQI3 630 aaKnown RBP18.91■□□□□ 0.62
PRPF19-201ENST00000227524 FAM129AQ9BZQ8 928 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 PNMA2Q9UL42 364 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 DAAM1Q9Y4D1 1078 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 FRMPD4Q14CM0 1322 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 SPDYE3A6NKU9 549 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 SFI1A8K8P3 1242 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 PPP1R12BO60237 982 aaPredicted RBP18.91■□□□□ 0.62
PRPF19-201ENST00000227524 NUDT17P0C025 328 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 EEF2P13639 858 aaKnown RBP18.91■□□□□ 0.62
PRPF19-201ENST00000227524 NMT1P30419 496 aaKnown RBP18.91■□□□□ 0.62
PRPF19-201ENST00000227524 MAP2K2P36507 400 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 RINT1Q6NUQ1 792 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 P3H4Q92791 437 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 CCDC17Q96LX7 622 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
PRPF19-201ENST00000227524 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
PRPF19-201ENST00000227524 EML1O00423 815 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 ENTPD3O75355 529 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 FAM13AO94988 1023 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 SCTRP47872 440 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 PMS2P54278 862 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 SNAP25P60880 206 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 KLRC3Q07444 240 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 ZNF211Q13398 564 aaPredicted RBP18.9■□□□□ 0.62
PRPF19-201ENST00000227524 DHX34Q14147 1143 aaKnown RBP18.9■□□□□ 0.62
PRPF19-201ENST00000227524 GPATCH11Q8N954 259 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 HAUS2Q9NVX0 235 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 ZNRF3Q9ULT6 936 aa18.9■□□□□ 0.62
PRPF19-201ENST00000227524 CBWD6Q4V339 395 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 CBWD3Q5JTY5 395 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 CBWD5Q5RIA9 395 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 CYB5D1Q6P9G0 228 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 JAMLQ86YT9 394 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 FUKQ8N0W3 1084 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 NEK9Q8TD19 979 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 CCT6BQ92526 530 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 GLG1Q92896 1179 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 MKL1Q969V6 931 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 MKNK1Q9BUB5 465 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 INTS2Q9H0H0 1204 aaKnown RBP18.89■□□□□ 0.62
PRPF19-201ENST00000227524 THAP2Q9H0W7 228 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 PABPC3Q9H361 631 aaKnown RBP18.89■□□□□ 0.62
PRPF19-201ENST00000227524 GOPCQ9HD26 462 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 TAS2R14Q9NYV8 317 aa18.89■□□□□ 0.62
PRPF19-201ENST00000227524 RBBP6Q7Z6E9 1792 aaKnown RBP18.89■□□□□ 0.61
PRPF19-201ENST00000227524 TNFAIP3P21580 790 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 CIITAP33076 1130 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.61
PRPF19-201ENST00000227524 COG2Q14746 738 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 ZC2HC1CQ53FD0 456 aaPredicted RBP18.89■□□□□ 0.61
PRPF19-201ENST00000227524 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 ZDHHC24Q6UX98 284 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 SIAH1Q8IUQ4 282 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 ALG3Q92685 438 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 COG5Q9UP83 839 aa18.89■□□□□ 0.61
PRPF19-201ENST00000227524 FAM170AA1A519 330 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CTNND1O60716 968 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 FOSP01100 380 aaPredicted RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 GHRP10912 638 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 VCAM1P19320 739 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 JAG1P78504 1218 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 R3HDM1Q15032 1099 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CLUL1Q15846 466 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 USH1GQ495M9 461 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CERKLQ49MI3 558 aaPredicted RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 DENND2CQ68D51 928 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 PARP9Q8IXQ6 854 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 MYCT1Q8N699 235 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 RNF25Q96BH1 459 aaPredicted RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 HVCN1Q96D96 273 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 PGM2Q96G03 612 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 KDM4CQ9H3R0 1056 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 SNX24Q9Y343 169 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 ANKRD62A6NC57 917 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CCDC172P0C7W6 258 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms