RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 IFIH1Q9BYX4 1025 aaKnown RBP29.41■■■□□ 2.3
STUB1-201ENST00000219548 IL23AQ9NPF7 189 aa29.41■■■□□ 2.3
STUB1-201ENST00000219548 PADI3Q9ULW8 664 aa29.41■■■□□ 2.3
STUB1-201ENST00000219548 INO80B-WBP1J3KQ70 363 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 MBTD1Q05BQ5 628 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 NFX1Q12986 1120 aaKnown RBP29.4■■■□□ 2.3
STUB1-201ENST00000219548 COASYQ13057 564 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 PNOCQ13519 176 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 POSTNQ15063 836 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 PLEKHG4Q58EX7 1191 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 IFNLR1Q8IU57 520 aaPredicted RBP29.4■■■□□ 2.3
STUB1-201ENST00000219548 ZBTB8OSQ8IWT0 167 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 CCDC65Q8IXS2 484 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 USP38Q8NB14 1042 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 DBF4BQ8NFT6 615 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 GPT2Q8TD30 523 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 NFKBIZQ9BYH8 718 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 INO80BQ9C086 356 aaPredicted RBP29.4■■■□□ 2.3
STUB1-201ENST00000219548 TBC1D7Q9P0N9 293 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 ST3GAL5Q9UNP4 418 aa29.4■■■□□ 2.3
STUB1-201ENST00000219548 TRAK2O60296 914 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 GAP43P17677 238 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 HERC4Q5GLZ8 1057 aaPredicted RBP29.39■■■□□ 2.3
STUB1-201ENST00000219548 C16orf59Q7L2K0 433 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 RPUSD2Q8IZ73 545 aaKnown RBP29.39■■■□□ 2.3
STUB1-201ENST00000219548 SPIRE2Q8WWL2 714 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 CCDC34Q96HJ3 373 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 FIZ1Q96SL8 496 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 C2orf40Q9H1Z8 148 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 ERVK-5Q9HDB9 667 aa29.39■■■□□ 2.3
STUB1-201ENST00000219548 SFPQP23246 707 aaKnown RBP eCLIP29.38■■■□□ 2.29
STUB1-201ENST00000219548 NMT1P30419 496 aaKnown RBP29.38■■■□□ 2.29
STUB1-201ENST00000219548 DPYDQ12882 1025 aa29.38■■■□□ 2.29
STUB1-201ENST00000219548 UNC13DQ70J99 1090 aa29.38■■■□□ 2.29
STUB1-201ENST00000219548 FAM178BQ8IXR5 827 aa29.38■■■□□ 2.29
STUB1-201ENST00000219548 ERCC4Q92889 916 aaPredicted RBP29.38■■■□□ 2.29
STUB1-201ENST00000219548 HPS3Q969F9 1004 aa29.38■■■□□ 2.29
STUB1-201ENST00000219548 ARHGAP28Q9P2N2 729 aa29.38■■■□□ 2.29
STUB1-201ENST00000219548 K7ENM7 598 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 KLRC4O43908 158 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 MYL1P05976 194 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 SMTNP53814 917 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 NCKAP1LP55160 1127 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 CATSPER4Q7RTX7 472 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 SEPT8Q92599 483 aa29.37■■■□□ 2.29
STUB1-201ENST00000219548 NTPCRQ9BSD7 190 aaKnown RBP29.37■■■□□ 2.29
STUB1-201ENST00000219548 LAMA2P24043 3122 aaKnown RBP29.37■■■□□ 2.29
STUB1-201ENST00000219548 GPR182O15218 404 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 TMEM161BQ8NDZ6 487 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 FGFBP2Q9BYJ0 223 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 CCDC113Q9H0I3 377 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 SEL1LQ9UBV2 794 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 PFKMP08237 780 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 CNKSR3Q6P9H4 555 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 TAS1R3Q7RTX0 852 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 HAUS6Q7Z4H7 955 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.36■■■□□ 2.292e-6■■■□□ 15
STUB1-201ENST00000219548 TMX1Q9H3N1 280 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 MRPL44Q9H9J2 332 aaKnown RBP29.36■■■□□ 2.29
STUB1-201ENST00000219548 USP20Q9Y2K6 914 aa29.36■■■□□ 2.29
STUB1-201ENST00000219548 PVALEFA0A1B0GWK0 134 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 DENND3A2RUS2 1198 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 RPN1P04843 607 aaKnown RBP29.35■■■□□ 2.29
STUB1-201ENST00000219548 EDN1P05305 212 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 EFNA5P52803 228 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 AMHR2Q16671 573 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 ZNF365Q70YC5 407 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 GDF15Q99988 308 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 OLFML3Q9NRN5 406 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 KCNG1Q9UIX4 513 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 PHLPP2Q6ZVD8 1323 aa29.35■■■□□ 2.29
STUB1-201ENST00000219548 B4GALT5O43286 388 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 ERLIN2O94905 339 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 PRKCBP05771 671 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 MAPTP10636 758 aaKnown RBP29.34■■■□□ 2.29
STUB1-201ENST00000219548 CAMK4Q16566 473 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 MAPK6Q16659 721 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 KMT5BQ4FZB7 885 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 OTOP2Q7RTS6 562 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 FZD8Q9H461 694 aa29.34■■■□□ 2.29
STUB1-201ENST00000219548 HOOK1Q9UJC3 728 aaKnown RBP29.34■■■□□ 2.29
STUB1-201ENST00000219548 PTPRSQ13332 1948 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 K7ERI5 159 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 TSPAN1O60635 241 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 CASP5P51878 434 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 EHHADHQ08426 723 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 ZC2HC1CQ53FD0 456 aaPredicted RBP29.33■■■□□ 2.29
STUB1-201ENST00000219548 TMEM240Q5SV17 173 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 PSRC1Q6PGN9 363 aaPredicted RBP29.33■■■□□ 2.29
STUB1-201ENST00000219548 GLIS3Q8NEA6 775 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 APBB2Q92870 758 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 EXOC1Q9NV70 894 aa29.33■■■□□ 2.29
STUB1-201ENST00000219548 PRMT7Q9NVM4 692 aaPredicted RBP29.33■■■□□ 2.29
STUB1-201ENST00000219548 PIN4Q9Y237 131 aaKnown RBP29.33■■■□□ 2.29
STUB1-201ENST00000219548 TTLL13PA6NNM8 815 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 MGEA5O60502 916 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 FGBP02675 491 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 FAM26FQ5R3K3 315 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 ZNF720Q7Z2F6 126 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 ELOA2Q8IYF1 753 aaPredicted RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms