RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PITPNM1O00562 1244 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 SELPP16109 830 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 ZC2HC1CQ53FD0 456 aaPredicted RBP30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 TRAF7Q6Q0C0 670 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 SMYD4Q8IYR2 804 aaPredicted RBP30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 C7orf61Q8IZ16 206 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 ZNF710Q8N1W2 664 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 C2orf40Q9H1Z8 148 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 MINDY3Q9H8M7 445 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 KCNG1Q9UIX4 513 aa30.03■■■□□ 2.4
CHMP4B-201ENST00000217402 DENND3A2RUS2 1198 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 INO80B-WBP1J3KQ70 363 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 PSMD2Q13200 908 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 FAM26DQ5JW98 314 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 ZNF720Q7Z2F6 126 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 KIAA0895Q8NCT3 520 aa30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 INO80BQ9C086 356 aaPredicted RBP30.02■■■□□ 2.4
CHMP4B-201ENST00000217402 TRIM43BA6NCK2 446 aa30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 DARSP14868 501 aaKnown RBP30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 CYP2C18P33260 490 aa30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 POU5F1BQ06416 359 aa30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 TRIM43Q96BQ3 446 aaPredicted RBP30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 PCDH10Q9P2E7 1040 aa30.01■■■□□ 2.39
CHMP4B-201ENST00000217402 MAPTP10636 758 aaKnown RBP30■■■□□ 2.39
CHMP4B-201ENST00000217402 CCL23P55773 120 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 MBTD1Q05BQ5 628 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 MORC3Q14149 939 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 SLC17A8Q8NDX2 589 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 NFKBIZQ9BYH8 718 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 OSBPL7Q9BZF2 842 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 GHRP10912 638 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 FGFR4P22455 802 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 EIF4BP23588 611 aaKnown RBP30■■■□□ 2.39
CHMP4B-201ENST00000217402 EFNA5P52803 228 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 ZNF658Q5TYW1 1059 aaPredicted RBP30■■■□□ 2.39
CHMP4B-201ENST00000217402 IFNLR1Q8IU57 520 aaPredicted RBP30■■■□□ 2.39
CHMP4B-201ENST00000217402 GZF1Q9H116 711 aaPredicted RBP30■■■□□ 2.39
CHMP4B-201ENST00000217402 WNT8AQ9H1J5 351 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 SIP14410 1827 aa30■■■□□ 2.39
CHMP4B-201ENST00000217402 PHLPP2Q6ZVD8 1323 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 H0YCG3 227 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 K7ERI5 159 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 KIAA0355O15063 1070 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 IQCF3P0C7M6 154 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 BMP6P22004 513 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 MBTPS1Q14703 1052 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 TAS1R3Q7RTX0 852 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 SRGAP1Q7Z6B7 1085 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 SCLYQ96I15 445 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 CCDC113Q9H0I3 377 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 MAPK8IP1Q9UQF2 711 aa29.99■■■□□ 2.39
CHMP4B-201ENST00000217402 SYCE3A1L190 88 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 EVI5O60447 810 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 PRPF6O94906 941 aaKnown RBP29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 ZSCAN23Q3MJ62 389 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 FBXO47Q5MNV8 452 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 TRIML1Q8N9V2 468 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 ST6GALNAC4Q9H4F1 302 aa29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 NOC2LQ9Y3T9 749 aaKnown RBP29.98■■■□□ 2.39
CHMP4B-201ENST00000217402 PPP1R37O75864 691 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 RAG1P15918 1043 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 ITGB8P26012 769 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 GTF2BQ00403 316 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 KCNA1Q09470 495 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 MAPK6Q16659 721 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 STXBP4Q6ZWJ1 553 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 EPM2AIP1Q7L775 607 aaPredicted RBP29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 DPF3Q92784 378 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 PRKAG2Q9UGJ0 569 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 TBX20Q9UMR3 447 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 USP20Q9Y2K6 914 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 PCDHB13Q9Y5F0 798 aa29.97■■■□□ 2.39
CHMP4B-201ENST00000217402 PRKCBP05771 671 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 STRN3Q13033 797 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 LPIN1Q14693 890 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 SASS6Q6UVJ0 657 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 SCFD1Q8WVM8 642 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 STRA6Q9BX79 667 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 TMEM134Q9H6X4 195 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 TANC1Q9C0D5 1861 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 RPS6KA5O75582 802 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 LETM1O95202 739 aaPredicted RBP29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 SFPQP23246 707 aaKnown RBP eCLIP29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 ALCAMQ13740 583 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 CATSPER4Q7RTX7 472 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 FAM228AQ86W67 206 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 NELFCDQ8IXH7 590 aa29.96■■■□□ 2.39
CHMP4B-201ENST00000217402 EIF3DO15371 548 aaKnown RBP eCLIP29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 B4GALT5O43286 388 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 ERLIN2O94905 339 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 TIMP1P01033 207 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 EDN1P05305 212 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 L1TD1Q5T7N2 865 aaKnown RBP29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 MYOCDQ8IZQ8 938 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 FZD8Q9H461 694 aa29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 AGO3Q9H9G7 860 aaKnown RBP29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 PRMT7Q9NVM4 692 aaPredicted RBP29.95■■■□□ 2.38
CHMP4B-201ENST00000217402 CD52P31358 61 aa29.94■■■□□ 2.38
CHMP4B-201ENST00000217402 TSHZ1Q6ZSZ6 1077 aa29.94■■■□□ 2.38
CHMP4B-201ENST00000217402 HVCN1Q96D96 273 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms