RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 A0A1W2PRG0 241 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 C5orf60A6NFR6 353 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 EXOC3O60645 756 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 NUDT17P0C025 328 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 VCAM1P19320 739 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 GBP1P32455 592 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 MAGOHP61326 146 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 JAG1P78504 1218 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 SETQ01105 290 aaPredicted RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 PRPF4BQ13523 1007 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 CEP55Q53EZ4 464 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 PHLDB3Q6NSJ2 640 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 MAGOHBQ96A72 148 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 MASTLQ96GX5 879 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 COG5Q9UP83 839 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 H0YHG0 523 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 P4HA2O15460 535 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 CFBP00751 764 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 VIL1P09327 827 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 KRT13P13646 458 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 ACTN3Q08043 901 aaPredicted RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 CETN1Q12798 172 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 IFT88Q13099 833 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 MAPK7Q13164 816 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 KCNV1Q6PIU1 500 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 INTS8Q75QN2 995 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 SEPT12Q8IYM1 358 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 SYCP3Q8IZU3 236 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 NLGN1Q8N2Q7 840 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 UBL4BQ8N7F7 174 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 CENPTQ96BT3 561 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 SEPT11Q9NVA2 429 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 TAS2R14Q9NYV8 317 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 DDX20Q9UHI6 824 aaKnown RBP14.39□□□□□ -0.11
SRP54-201ENST00000216774 ATP8A1Q9Y2Q0 1164 aa14.39□□□□□ -0.11
SRP54-201ENST00000216774 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 ALCAMQ13740 583 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ARHGAP44Q17R89 818 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 RNF187Q5TA31 235 aaPredicted RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 B3GNT9Q6UX72 402 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 JAMLQ86YT9 394 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ALG3Q92685 438 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 CABS1Q96KC9 395 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 PABPC3Q9H361 631 aaKnown RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 ACTR5Q9H9F9 607 aaPredicted RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 CNOT8Q9UFF9 292 aaKnown RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 LOXHD1Q8IVV2 1947 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ARHGEF35A5YM69 484 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 PHF2O75151 1096 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 GGPS1O95749 300 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 TMOD1P28289 359 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 CHRNA3P32297 505 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 BYSLQ13895 437 aaKnown RBP14.38□□□□□ -0.11
SRP54-201ENST00000216774 PALB2Q86YC2 1186 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 RAPGEF5Q92565 580 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 PGM2Q96G03 612 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 TEKT3Q9BXF9 490 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
SRP54-201ENST00000216774 COL11A2P13942 1736 aaPredicted RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 KIAA0391O15091 583 aaKnown RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 ECE2O60344 883 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 HIP1RO75146 1068 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 PMS2P54278 862 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 CROCCP2Q86T23 111 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 MORC4Q8TE76 937 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 P3H4Q92791 437 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 HOOK2Q96ED9 719 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 RIT2Q99578 217 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 LXNQ9BS40 222 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 GOPCQ9HD26 462 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 PARP2Q9UGN5 583 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
SRP54-201ENST00000216774 HERC5Q9UII4 1024 aaKnown RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 ZNF646O15015 1829 aaPredicted RBP14.37□□□□□ -0.11
SRP54-201ENST00000216774 DCDC2CA8MYV0 355 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 PODXLO00592 558 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 LRRN2O75325 713 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 FTLP02792 175 aaPredicted RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 SMTNP53814 917 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 GPC5P78333 572 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms