RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 WNT8AQ9H1J5 351 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 SUDS3Q9H7L9 328 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 PNPLA7Q6ZV29 1317 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 FTLP02792 175 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TRIM28Q13263 835 aaKnown RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 KCNB1Q14721 858 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 KIF19Q2TAC6 998 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 CELF1Q92879 486 aaKnown RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 ACAP3Q96P50 834 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 INTS2Q9H0H0 1204 aaKnown RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 COL15A1P39059 1388 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TMEM247A6NEH6 219 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 GGPS1O95749 300 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TWF2Q6IBS0 349 aaKnown RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 PASD1Q8IV76 773 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 ST13P4Q8IZP2 240 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 CDC26Q8NHZ8 85 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 SNAP23O00161 211 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 POTEIP0CG38 1075 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 COPS2P61201 443 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 MRPS25P82663 173 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 EIF2AQ9BY44 585 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 DDX56Q9NY93 547 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 NMT2O60551 498 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 GNA15P30679 374 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TTLL4Q14679 1199 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 FAM47EQ6ZV65 393 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 NOP9Q86U38 636 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 RFFLQ8WZ73 363 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 WRNIP1Q96S55 665 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 MRPL4Q9BYD3 311 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 GCOM2Q9BZD3 368 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TAF1DQ9H5J8 278 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 BFARQ9NZS9 450 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TRIM33Q9UPN9 1127 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 CPDO75976 1380 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 MAGOHP61326 146 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 PSMC1P62191 440 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 DRP2Q13474 957 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TRMT10CQ7L0Y3 403 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TRIM59Q8IWR1 403 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TRIML2Q8N7C3 387 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 GABBR1Q9UBS5 961 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 PRDM15P57071 1507 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 BNIP3LO60238 219 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 BCAR1P56945 870 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 PPP2R2AP63151 447 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 GPSM2P81274 684 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 HEATR6Q6AI08 1181 aaKnown RBP14.44□□□□□ -0.1
SF3A1-201ENST00000215793 EXT2Q93063 718 aa14.44□□□□□ -0.1
SF3A1-201ENST00000215793 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 FRMD5Q7Z6J6 570 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 BTBD6Q96KE9 485 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 VPS11Q9H270 941 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 STOML1Q9UBI4 398 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ECE2O60344 883 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 SNX2O60749 519 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 GGCXP38435 758 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ARHGDIAP52565 204 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 TAP1Q03518 808 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 PDIA5Q14554 519 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 MORF4L2Q15014 288 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 KIAA1755Q5JYT7 1200 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 FRA10AC1Q70Z53 315 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 CNPY4Q8N129 248 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 LXNQ9BS40 222 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 DDX47Q9H0S4 455 aaKnown RBP14.43□□□□□ -0.1
SF3A1-201ENST00000215793 HERC5Q9UII4 1024 aaKnown RBP14.43□□□□□ -0.1
SF3A1-201ENST00000215793 GMNCA6NCL1 334 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 BRAFP15056 766 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 EPHA7Q15375 998 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 CLEC17AQ6ZS10 378 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 OLA1Q9NTK5 396 aaKnown RBP14.43□□□□□ -0.1
SF3A1-201ENST00000215793 SLC9A2Q9UBY0 812 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 INTUQ9ULD6 942 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 HPCAL4Q9UM19 191 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 M0QYV0 167 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ASAP2O43150 1006 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 MYL3P08590 195 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 MAGEA9P43362 315 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 HNRNPH2P55795 449 aaKnown RBP14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ITPRIPL1Q6GPH6 555 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 SWSAP1Q6NVH7 229 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 BRINP3Q76B58 766 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 LCA5Q86VQ0 697 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
SF3A1-201ENST00000215793 TTC8Q8TAM2 541 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms