RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TISP43B9A030 160 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CNGA1P29973 690 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 ADSSP30520 456 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 ARL2P36404 184 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 STAT5BP51692 787 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 VAMP7P51809 220 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 MTERF2Q49AM1 385 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CELF3Q5SZQ8 465 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CCDC62Q6P9F0 684 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 TRMT1LQ7Z2T5 733 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 VTI1AQ96AJ9 217 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 SPAG5Q96R06 1193 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 LUC7LQ9NQ29 371 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 TRIM10Q9UDY6 481 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CDC23Q9UJX2 597 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 MYH9P35579 1960 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 ATP8B3O60423 1300 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 ADGRA3Q8IWK6 1321 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 EFCAB8A8MWE9 144 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 PDHXO00330 501 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 GARTP22102 1010 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 MAGEA1P43355 309 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 MYL7Q01449 175 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 KLHL30Q0D2K2 578 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 SLC18A3Q16572 532 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CBWD6Q4V339 395 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 TDRD12Q587J7 1177 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CBWD3Q5JTY5 395 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 CBWD5Q5RIA9 395 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 LMO3Q8TAP4 145 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 STK33Q9BYT3 514 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 INTS2Q9H0H0 1204 aaKnown RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 MLXIPQ9HAP2 919 aa15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 GBA2Q9HCG7 927 aaPredicted RBP15.6■□□□□ 0.09
RTFDC1-201ENST00000023939 ANO9A1A5B4 782 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 ANKRD63C9JTQ0 380 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 SORBS3O60504 671 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 TADA3O75528 432 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 GFPT2O94808 682 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 ARIH2O95376 493 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 TRIM49P0CI25 452 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 TRIM49CP0CI26 452 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 CYP2C8P10632 490 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 NAMPTP43490 491 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 SOX10P56693 466 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 AMPD2Q01433 879 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 C1orf220Q5T0J3 134 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 C10orf76Q5T2E6 689 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 PLPPR4Q7Z2D5 763 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 MNS1Q8NEH6 495 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 TMC2Q8TDI7 906 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 SLC7A3Q8WY07 619 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 GPR20Q99678 358 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 KIFC3Q9BVG8 833 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 CARD6Q9BX69 1037 aa15.59■□□□□ 0.09
RTFDC1-201ENST00000023939 EMSYQ7Z589 1322 aa15.58■□□□□ 0.09
RTFDC1-201ENST00000023939 CCL15-CCL14A0A0B4J2E2 113 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 PIGRP01833 764 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 ZBTB48P10074 688 aaPredicted RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 FERP16591 822 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 STAT1P42224 750 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 SLC26A2P50443 739 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 GFPT1Q06210 699 aaPredicted RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 CETN1Q12798 172 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 CCL15Q16663 113 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNF792Q3KQV3 632 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 SLC39A4Q6P5W5 647 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 TAS1R3Q7RTX0 852 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 EXOC8Q8IYI6 725 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 BRI3BPQ8WY22 251 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 BBXQ8WY36 941 aaPredicted RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 MFSD14AQ96MC6 490 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 MAP7D2Q96T17 732 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 AZI2Q9H6S1 392 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNF408Q9H9D4 720 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 EFCC1Q9HA90 598 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 APEX2Q9UBZ4 518 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 DIS3Q9Y2L1 958 aaKnown RBP15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 STYXL1Q9Y6J8 313 aa15.58■□□□□ 0.08
RTFDC1-201ENST00000023939 STRNO43815 780 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 GAS2O43903 313 aaKnown RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 MAFO75444 373 aaPredicted RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 GLRA2P23416 452 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 GTF2H1P32780 548 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 TUBB4BP68371 445 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 PPP3CAQ08209 521 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 SNRNP35Q16560 246 aaKnown RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 WHAMMP3Q1A5X7 153 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms