RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Sept8Q8CHH9 429 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Wdr11Q8K1X1 1223 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Upb1Q8VC97 393 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Themis2Q91YX0 663 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fgd4Q91ZT5 766 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Sdr42e1Q9D665 394 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Eya4Q9Z191 616 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tsc2Q61037 1814 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 AfdnQ9QZQ1 1820 aaKnown RBP7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pgap3A2A559 320 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Dnajc25A2ALW5 357 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Dhtkd1A2ATU0 921 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gm20503G3UZK1 150 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Inpp5jP59644 1003 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Lig3P97386 1015 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fscn2Q32M02 492 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gemin4Q6P6L6 1058 aaKnown RBP7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ano6Q6P9J9 911 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cep128Q8BI22 1102 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Thap3Q8BJ25 218 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Slc15a5Q8CBB2 566 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fubp1Q91WJ8 651 aaKnown RBP7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Dqx1Q924H9 718 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zfyve19Q9DAZ9 389 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cep350E9Q309 3095 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mmrn2A6H6E2 943 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Rbm34Q8C5L7 375 aaKnown RBP7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zswim4Q8C7B8 1101 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pde5aQ8CG03 865 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kremen1Q99N43 473 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Drc3Q9D5E4 523 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pold3Q9EQ28 462 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Golga5Q9QYE6 729 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mbtps1Q9WTZ2 1052 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Nr1h3Q9Z0Y9 445 aa7.5□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Xpnpep3B7ZMP1 506 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Apol10bG3X9K7 334 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kpna6O35345 536 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ppm1aP49443 382 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Btbd1P58544 488 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Prr11Q8BHE0 368 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Stxbp5Q8K400 1152 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Q91WD4 421 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mmtag2Q99LX5 260 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Arhgap8Q9CXP4 425 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mkrn2Q9ERV1 416 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Arl6ip4Q9JM93 229 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Myh7bA2AQP0 1941 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Sycp2lA0A0M3U1B0 842 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Krt18P05784 423 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Frat1P70339 274 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Spdye4aQ5IBH6 268 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ppp2r5cQ60996 524 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cnnm4Q69ZF7 771 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Atp11bQ6DFW5 1175 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Jade1Q6ZPI0 834 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Celf4Q7TSY6 486 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Nipa1Q8BHK1 323 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Slc38a7Q8BWH0 463 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ccdc12Q8R344 166 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tbc1d13Q8R3D1 400 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Olfr532Q8VGT4 309 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 B4galt5Q9JMK0 388 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Add1Q9QYC0 735 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fxr2Q9WVR4 673 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Baz2bA2AUY4 2123 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ccdc88aQ5SNZ0 1873 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pbx2O35984 430 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Smpd2O70572 419 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 RabggtbP53612 339 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Usp25P57080 1055 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PomkQ3TUA9 349 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Srebf2Q3U1N2 1130 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam214aQ69ZK7 1075 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gpbp1l1Q6NZP2 473 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kiaa0391Q8JZY4 584 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kif17Q99PW8 1038 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ssr1Q9CY50 286 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tube1Q9D6T1 475 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Sfmbt1Q9JMD1 863 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pitpnm1O35954 1243 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tsta3P23591 321 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tulp2P46686 562 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 SPINDOCQ05AH6 381 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fkbp3Q62446 224 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Map3k11Q80XI6 850 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 GopcQ8BH60 463 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Wdr3Q8BHB4 942 aaKnown RBP7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Acbd3Q8BMP6 525 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ube2q2Q8K2Z8 378 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Taf12Q8VE65 161 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ly6kQ9CWP4 154 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Git2Q9JLQ2 708 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Homer2Q9QWW1 354 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Efcab12V9GXH0 673 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zfhx2Q2MHN3 2562 aa7.49□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kansl3A2RSY1 903 aaKnown RBP7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Slc16a6B1AT66 607 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 AurkbO70126 345 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Man1a2P39098 641 aa7.48□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms