RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Hic2Q9JLZ6 619 aaKnown RBP9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 WizO88286 1684 aaKnown RBP9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lrrc38A2VDH3 298 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccdc85cE9Q6B2 420 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm3187M0QWW3 260 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tex11Q14AT2 947 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mysm1Q69Z66 819 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Znf532Q6NXK2 1036 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PrcpQ7TMR0 491 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Drd5Q8BLD9 478 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc38a7Q8BWH0 463 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 WdpcpQ8C456 722 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sulf1Q8K007 870 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tnip2Q99JG7 430 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tex12Q9CR81 123 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dbndd2Q9CRD4 158 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sucla2Q9Z2I9 463 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 MeiocA2AG06 965 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm5152L7N200 190 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 MafgO54790 162 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gap43P06837 227 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Orm2P07361 207 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 RargP18911 458 aaKnown RBP9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nek1P51954 1203 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rasa2P58069 847 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cyth2P63034 400 aaKnown RBP9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vamp7P70280 220 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Casp4P70343 373 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 S100gP97816 79 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ttc39dQ0VF76 604 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Prkaa1Q5EG47 559 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cyp7b1Q60991 507 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pim2Q62070 370 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gucy1b2Q8BXH3 824 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Osbpl6Q8BXR9 959 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 GanQ8CA72 597 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Abcf3Q8K268 709 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Coa7Q921H9 231 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Aldh1b1Q9CZS1 519 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cd2apQ9JLQ0 637 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Plch2A2AP18 1501 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ankfn1A0A140LIW7 1083 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ttll10A4Q9F3 704 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rabgap1lA6H6A9 815 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cyp3a59D3Z2W7 503 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Snap23O09044 210 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 DffaO54786 331 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Prkg1P0C605 671 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Psmc5P62196 406 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tcf12Q61286 706 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp91Q62511 572 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tp53bp2Q8CG79 1128 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Plcg1Q62077 1302 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ttc38A3KMP2 465 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Morc3F7BJB9 942 aaKnown RBP9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cd22P35329 862 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dok7Q18PE0 504 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nudt18Q3U2V3 323 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 HexdcQ3U4H6 486 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Yipf3Q3UDR8 347 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 WhammQ571B6 793 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kctd1Q5M956 257 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Homer3Q99JP6 356 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Klhl28Q9CR40 571 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Copg1Q9QZE5 874 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nfe2l3Q9WTM4 660 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rgs22G3UYX5 1258 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc4a1P04919 929 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Csn1s1P19228 313 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 G3bp2P97379 482 aaKnown RBP9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Olfm4Q3UZZ4 505 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trpc1Q61056 793 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 RubcnQ80U62 956 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pdlim2Q8R1G6 349 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp566Q8VCI1 386 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pex19Q8VCI5 299 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Spata17Q9D552 379 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PycardQ9EPB4 193 aa9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cse1lQ9ERK4 971 aaKnown RBP9.7□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 4930444G20RikD3Z741 495 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm5795E9PZN8 263 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Hmgxb3G3X9M3 1254 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp408H7BX78 710 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm3402K7N5P2 326 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PbsnO08976 174 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ifnb1P01575 182 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Epha7Q61772 998 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sin3bQ62141 1098 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gtf3c4Q8BMQ2 817 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dcun1d2Q8BZJ7 259 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trpv6Q91WD2 767 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Antxr1Q9CZ52 562 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sun1Q9D666 913 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Morc1Q9WVL5 950 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lbhd1A0A087WPA0 259 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lzts3A2AHG0 700 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Apoa4P06728 395 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 S100a9P31725 113 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Akr1b1P45376 316 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zc3hav1Q3UPF5 946 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms