RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 HMGB1P1B2RPK0 211 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 PDXKO00764 312 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 PRKCBP05771 671 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 EIF4A3P38919 411 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 CAP2P40123 477 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 KRT31Q15323 416 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 RNF149Q8NC42 400 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SKA2Q8WVK7 121 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SCYL1Q96KG9 808 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 LGALS16A8MUM7 142 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 CPP00450 1065 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 SKIP12755 728 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 PSMA2P25787 234 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 DGKDQ16760 1214 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 HOXC6P09630 235 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 CA4P22748 312 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 GKAP1Q5VSY0 366 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 DHX38Q92620 1227 aaKnown RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 TRPV6Q9H1D0 765 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 CYFIP1Q7L576 1253 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 CNPY4Q8N129 248 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 MCUR1Q96AQ8 359 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 TJP3O95049 919 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 ZBED1O96006 694 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 MYBL1P10243 752 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 DMTNQ08495 405 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 MYRIPQ8NFW9 859 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
SCN1B-208ENST00000640135 PRDM5Q9NQX1 630 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-208ENST00000640135 ZNF609O15014 1411 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 CD2BP2O95400 341 aaKnown RBP11.82□□□□□ -0.52
SCN1B-208ENST00000640135 RALAP11233 206 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 ZNF18P17022 549 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 SDC4P31431 198 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 GCLMP48507 274 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 TAP1Q03518 808 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 RAD51Q06609 339 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 MAP3K21Q5TCX8 1036 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 GOLGA8KD6RF30 607 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 HIP1RO75146 1068 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 NDUFA10O95299 355 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 CEP57Q86XR8 500 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 MORC4Q8TE76 937 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
SCN1B-208ENST00000640135 RILPQ96NA2 401 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 MXRA8Q9BRK3 442 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 ANKEF1Q9NU02 776 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 PIN4Q9Y237 131 aaKnown RBP11.82□□□□□ -0.52
SCN1B-208ENST00000640135 UBE4BO95155 1302 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 CD4P01730 458 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 APOEP02649 317 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 ELF2Q15723 593 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 FBXL13Q8NEE6 735 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 VCXQ9H320 206 aa11.82□□□□□ -0.52
SCN1B-208ENST00000640135 PRMT7Q9NVM4 692 aaPredicted RBP11.82□□□□□ -0.52
SCN1B-208ENST00000640135 CPB1P15086 417 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 RBP5P82980 135 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 SLMAPQ14BN4 828 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 TMEM270Q6UE05 265 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 ARRDC4Q8NCT1 418 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 GANCQ8TET4 914 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 CABS1Q96KC9 395 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 A8MXQ7 604 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 SLC16A3O15427 465 aaKnown RBP11.81□□□□□ -0.52
SCN1B-208ENST00000640135 ICAM1P05362 532 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 GPC5P78333 572 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 VPS39Q96JC1 886 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
SCN1B-208ENST00000640135 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 CCDC188H7C350 402 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 CXCL11O14625 94 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 NOL3O60936 208 aaKnown RBP11.81□□□□□ -0.52
SCN1B-208ENST00000640135 BACE1P56817 501 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
SCN1B-208ENST00000640135 CEP85LQ5SZL2 805 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 GLB1LQ6UWU2 654 aa11.81□□□□□ -0.52
SCN1B-208ENST00000640135 PLEKHH3Q7Z736 793 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms