RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	SYT15	Q9BQS2	421 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	ZWILCH	Q9H900	591 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	IFT122	Q9HBG6	1241 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	C6orf50	Q9HD87	102 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	COL4A3BP	Q9Y5P4	624 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	ZNF76	P36508	570 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	LBR	Q14739	615 aa	Known RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	TNIP1	Q15025	636 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	SPRED3	Q2MJR0	410 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	CC2D2B	Q6DHV5	1058 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	ANO7	Q6IWH7	933 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	UCMA	Q8WVF2	138 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	MTBP	Q96DY7	904 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	LRGUK	Q96M69	825 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	ERP44	Q9BS26	406 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	SARS	P49591	514 aa	Known RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	SERPINB8	P50452	374 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	SLC34A1	Q06495	639 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	TBL3	Q12788	808 aa	Known RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	COL23A1	Q86Y22	540 aa	Predicted RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	TBC1D10C	Q8IV04	446 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	TMCO5A	Q8N6Q1	288 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	ZNF184	Q99676	751 aa	Predicted RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	CYP4F11	Q9HBI6	524 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	NMRK1	Q9NWW6	199 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	SH3GLB1	Q9Y371	365 aa		12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.14	□□□□□ -0.47
SPIN3-231	ENST00000639895	IGKV5-2	P06315	115 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	FCER1A	P12319	257 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ITGA4	P13612	1032 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ASPH	Q12797	758 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	PPP2R5B	Q15173	497 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	FAM26F	Q5R3K3	315 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	WASHC2D	Q5SRD0	308 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	METTL13	Q8N6R0	699 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	TTC17	Q96AE7	1141 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ABHD8	Q96I13	439 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ANKRD2	Q9GZV1	360 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	TMOD4	Q9NZQ9	345 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	CEP72	Q9P209	647 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	AGAP1	Q9UPQ3	857 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	COMMD3-BMI1	R4GMX3	469 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	FAM187A	A6NFU0	413 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895		B2RBV5	119 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	UNC5C	O95185	931 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	PPID	Q08752	370 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	DCTN2	Q13561	401 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	SLC18A3	Q16572	532 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	RBM12B	Q8IXT5	1001 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	LENG1	Q96BZ8	264 aa	Predicted RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	TBC1D10A	Q9BXI6	508 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	SEMA4A	Q9H3S1	761 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	GMNN	O75496	209 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	GNA14	O95837	355 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ENO1	P06733	434 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	GNAQ	P50148	359 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	PPP2R5C	Q13362	524 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	C16orf72	Q14CZ0	275 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	NAB2	Q15742	525 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	CCDC137	Q6PK04	289 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	KIAA2013	Q8IYS2	634 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	C4orf33	Q8N1A6	199 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	NDUFA13	Q9P0J0	144 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	UST	Q9Y2C2	406 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	NUB1	Q9Y5A7	615 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	ABCC12	Q96J65	1359 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	PCDH11X	Q9BZA7	1347 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	PCDH11Y	Q9BZA8	1340 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	SSU72P8	A0A1W2PR75	194 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	FAM196B	A6NMK8	535 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	SCG2	P13521	617 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	HSPA6	P17066	643 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	C10orf76	Q5T2E6	689 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	LRRC8B	Q6P9F7	803 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	WDR59	Q6PJI9	974 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	JAML	Q86YT9	394 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	CCDC125	Q86Z20	511 aa		12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	TRIM56	Q9BRZ2	755 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	UBE2O	Q9C0C9	1292 aa	Known RBP	12.13	□□□□□ -0.47
SPIN3-231	ENST00000639895	CLPTM1	O96005	669 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	TPD52	P55327	224 aa	Predicted RBP	12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	KYNU	Q16719	465 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	TAF1B	Q53T94	588 aa	Predicted RBP	12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	TMEM110	Q86TL2	294 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	NLRP7	Q8WX94	980 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	MYLK2	Q9H1R3	596 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	SENP2	Q9HC62	589 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	PGM3	O95394	542 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	PLS3	P13797	630 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	PDE6A	P16499	860 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	LIFR	P42702	1097 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	USP11	P51784	963 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	CNGA3	Q16281	694 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	TRIM11	Q96F44	468 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	PUS3	Q9BZE2	481 aa	Known RBP	12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	PHTF1	Q9UMS5	762 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895		H3BRJ5	948 aa		12.12	□□□□□ -0.47
SPIN3-231	ENST00000639895	HNRNPCL1	O60812	293 aa	Known RBP	12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms