RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 MAGEF1Q9HAY2 307 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 ANKFY1Q9P2R3 1169 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 LRFN2Q9ULH4 789 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 SLC26A4O43511 780 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PRPF6O94906 941 aaKnown RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 HOXD8P13378 290 aaPredicted RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 GAP43P17677 238 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 CD52P31358 61 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 LIG4P49917 911 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 SLC12A3P55017 1021 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 OSTNP61366 133 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 MAPK6Q16659 721 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 FAM126BQ8IXS8 530 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 BADQ92934 168 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 SEZ6LQ9BYH1 1024 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 XPNPEP1Q9NQW7 623 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 RMND1Q9NWS8 449 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 UMODL1Q5DID0 1318 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PES1O00541 588 aaKnown RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 GAS2O43903 313 aaKnown RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PRKCBP05771 671 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 CKBP12277 381 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 GLRA2P23416 452 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 FAAP100Q0VG06 881 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 COASYQ13057 564 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 GIT2Q14161 759 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 HIC1Q14526 733 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 C1orf186Q6ZWK4 172 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 FMR1NBQ8N0W7 255 aaPredicted RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 SEPT8Q92599 483 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 TRIM9Q9C026 710 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 DHX33Q9H6R0 707 aaKnown RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 KCNG1Q9UIX4 513 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PCDHB13Q9Y5F0 798 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 ZNF236Q9UL36 1845 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 ACTN4O43707 911 aaKnown RBP6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PLS3P13797 630 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 CAPN2P17655 700 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 KCNJ6P48051 423 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 STX17P56962 302 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 KMT5BQ4FZB7 885 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 NAALADL2Q58DX5 795 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 HYIQ5T013 277 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 OTOP2Q7RTS6 562 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 HAUS6Q7Z4H7 955 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 SERINC5Q86VE9 423 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 MYOCDQ8IZQ8 938 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 NME8Q8N427 588 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 ADPGKQ9BRR6 497 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 C2orf40Q9H1Z8 148 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 PCDHA5Q9Y5H7 936 aa6.39□□□□□ -1.39
HNRNPU-220ENST00000639667 HNRNPDLO14979 420 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 KIF20AO95235 890 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 ACTN1P12814 892 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CSF2RAP15509 400 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 NPTX2P47972 431 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CDC42EP1Q00587 391 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 MLLT1Q03111 559 aaPredicted RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 TARBP2Q15633 366 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 ZC2HC1CQ53FD0 456 aaPredicted RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 SPOUT1Q5T280 376 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CCDC183Q5T5S1 534 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CNNM4Q6P4Q7 775 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 HS2ST1Q7LGA3 356 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 SMYD4Q8IYR2 804 aaPredicted RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 TMEM87AQ8NBN3 555 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 WNT8BQ93098 351 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CPB2Q96IY4 423 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CLSTN2Q9H4D0 955 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CDHR5Q9HBB8 845 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 PDLIM7Q9NR12 457 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 EXOC7Q9UPT5 735 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 PPME1Q9Y570 386 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 H0YCG3 227 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 GPR182O15218 404 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 STBD1O95210 358 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 COL6A1P12109 1028 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 MNX1P50219 401 aaPredicted RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 GPC3P51654 580 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 CAPSQ13938 189 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 MARCH8Q5T0T0 291 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 THNSL1Q8IYQ7 743 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 KCTD17Q8N5Z5 321 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 RDH13Q8NBN7 331 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 DBF4BQ8NFT6 615 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 GPT2Q8TD30 523 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 LRRC15Q8TF66 581 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 BSNDQ8WZ55 320 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 TSG101Q99816 390 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 NOC4LQ9BVI4 516 aaKnown RBP6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 TIPINQ9BVW5 301 aa6.38□□□□□ -1.39
HNRNPU-220ENST00000639667 IFIH1Q9BYX4 1025 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms