RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 GAGE12BA1L429 117 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 GAGE12HA6NDE8 117 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 MANSC4A6NHS7 340 aaPredicted RBP1.96□□□□□ -2.1
LMBR1-222ENST00000638959 MSCO60682 206 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 ITGAMP11215 1152 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 AOAHP28039 575 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 SESN2P58004 480 aaPredicted RBP1.96□□□□□ -2.1
LMBR1-222ENST00000638959 TUBA4AP68366 448 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 PDE4CQ08493 712 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 EIF2B5Q13144 721 aaKnown RBP1.96□□□□□ -2.1
LMBR1-222ENST00000638959 GAGE13Q4V321 117 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 PIK3R6Q5UE93 754 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 DENND5AQ6IQ26 1287 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 ZDHHC17Q8IUH5 632 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 RPL36ALQ969Q0 106 aaKnown RBP1.96□□□□□ -2.1
LMBR1-222ENST00000638959 TXLNGQ9NUQ3 528 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 ASB6Q9NWX5 421 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 UCKL1Q9NWZ5 548 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 NPFFR2Q9Y5X5 522 aa1.96□□□□□ -2.1
LMBR1-222ENST00000638959 C2orf78A6NCI8 922 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 PRAMEF25A6NGN4 478 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 FAM90A27PA6NNH2 459 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 B4E1Z4 1266 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 MT3P25713 68 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 BMPR1AP36894 532 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 RARRES1P49788 294 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 ZNF143P52747 638 aaPredicted RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 GFRA1P56159 465 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 MAP3K12Q12852 859 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 DDB1Q16531 1140 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 PPP2R5EQ16537 467 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 ZNF260Q3ZCT1 412 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 HABP4Q5JVS0 413 aaKnown RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 AKNAD1Q5T1N1 836 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 ZNF626Q68DY1 528 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 APBB1IPQ7Z5R6 666 aaPredicted RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 VGLL2Q8N8G2 317 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 C19orf47Q8N9M1 422 aaKnown RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 GFM2Q969S9 779 aaKnown RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 CCDC140Q96MF4 163 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 AMNQ9BXJ7 453 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 RNF181Q9P0P0 153 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 LRP2BPQ9P2M1 347 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 ARPP21Q9UBL0 812 aaPredicted RBP1.95□□□□□ -2.1
LMBR1-222ENST00000638959 DKK2Q9UBU2 259 aa1.95□□□□□ -2.1
LMBR1-222ENST00000638959 MAST3O60307 1309 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 MOSPD3O75425 235 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 STC2O76061 302 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 GAS8-AS1O95177 125 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 MPIG6BO95866 241 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 EGR2P11161 476 aaPredicted RBP1.94□□□□□ -2.1
LMBR1-222ENST00000638959 DDX6P26196 483 aaKnown RBP eCLIP1.94□□□□□ -2.1
LMBR1-222ENST00000638959 ITGAEP38570 1179 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 NPEPPSP55786 919 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 SPIDRQ14159 915 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 KIZQ2M2Z5 673 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 ZNF227Q86WZ6 799 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 PLXDC1Q8IUK5 500 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 DPF1Q92782 380 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 DCLRE1CQ96SD1 692 aaKnown RBP1.94□□□□□ -2.1
LMBR1-222ENST00000638959 CPPED1Q9BRF8 314 aaPredicted RBP1.94□□□□□ -2.1
LMBR1-222ENST00000638959 NDC1Q9BTX1 674 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 PHF20Q9BVI0 1012 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 GPR27Q9NS67 375 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 BTBD7Q9P203 1132 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 SLC17A6Q9P2U8 582 aa1.94□□□□□ -2.1
LMBR1-222ENST00000638959 TOX4O94842 621 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 SPDEFO95238 335 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 HLA-DOAP06340 250 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 PRR35P0CG20 571 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 VSIG10L2P0DP72 767 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 TNFRSF1BP20333 461 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 FDXRP22570 491 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 ITPKBP27987 946 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 SSBP2P81877 361 aaPredicted RBP1.93□□□□□ -2.1
LMBR1-222ENST00000638959 FAM214AQ32MH5 1076 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 SLC9A4Q6AI14 798 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 FBXL22Q6P050 247 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 MEPCEQ7L2J0 689 aaKnown RBP1.93□□□□□ -2.1
LMBR1-222ENST00000638959 NLGN4XQ8N0W4 816 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 BCL6BQ8N143 479 aaPredicted RBP1.93□□□□□ -2.1
LMBR1-222ENST00000638959 KRT78Q8N1N4 520 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 SH3RF2Q8TEC5 729 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 HASPINQ8TF76 798 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 TMEM255BQ8WV15 326 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 C1orf159Q96HA4 380 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 EPC1Q9H2F5 836 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 EBF3Q9H4W6 596 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 ANLNQ9NQW6 1124 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 IL17RBQ9NRM6 502 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 LRIT1Q9P2V4 623 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 DENND2AQ9ULE3 1009 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 CHST2Q9Y4C5 530 aa1.93□□□□□ -2.1
LMBR1-222ENST00000638959 EIF6P56537 245 aaKnown RBP1.92□□□□□ -2.1
LMBR1-222ENST00000638959 EXOSC10Q01780 885 aaKnown RBP1.92□□□□□ -2.1
LMBR1-222ENST00000638959 ADCY1Q08828 1119 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 VPS72Q15906 364 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 SV2CQ496J9 727 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 SLC35F1Q5T1Q4 408 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 EP400NLQ6ZTU2 488 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms