RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 HERC6Q8IVU3 1022 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 SYT2Q8N9I0 419 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 DEPTORQ8TB45 409 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 TOP1MTQ969P6 601 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 TIFAQ96CG3 184 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 VWCEQ96DN2 955 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ZNF668Q96K58 619 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 SPATA32Q96LK8 384 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 DRC1Q96MC2 740 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 PLIN2Q99541 437 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ADAM2Q99965 735 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 PYM1Q9BRP8 204 aaKnown RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 MMTAG2Q9BU76 263 aaKnown RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 SCAND2PQ9GZW5 306 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 POLR3FQ9H1D9 316 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 C17orf75Q9HAS0 396 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ERVK-5Q9HDB9 667 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 FBXO2Q9UK22 296 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 PCDHB7Q9Y5E2 793 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 SCN5AQ14524 2016 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 PHLPP2Q6ZVD8 1323 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 LRRIQ4A6NIV6 560 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 GRXCR1A8MXD5 290 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 INO80B-WBP1J3KQ70 363 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 HOXA2O43364 376 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 GJB5O95377 273 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 EOMESO95936 686 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 DNAJB2P25686 324 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 NAMPTP43490 491 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 FXR1P51114 621 aaKnown RBP eCLIP9.1□□□□□ -0.95
PNKP-226ENST00000636840 EFNA5P52803 228 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 PTENP60484 403 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 AMPD3Q01432 767 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 DHX8Q14562 1220 aaKnown RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 KARSQ15046 597 aaKnown RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 RINT1Q6NUQ1 792 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 FAM117BQ6P1L5 589 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.1□□□□□ -0.95
PNKP-226ENST00000636840 APBB1IPQ7Z5R6 666 aaPredicted RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 FAM228AQ86W67 206 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 EPSTI1Q96J88 318 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 CLIC6Q96NY7 704 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 PNMA5Q96PV4 448 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 YME1L1Q96TA2 773 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 NFKBIZQ9BYH8 718 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 PBX4Q9BYU1 374 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 XPNPEP1Q9NQW7 623 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 RGS18Q9NS28 235 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 PRMT7Q9NVM4 692 aaPredicted RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 LARSQ9P2J5 1176 aaKnown RBP9.1□□□□□ -0.95
PNKP-226ENST00000636840 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
PNKP-226ENST00000636840 MYO9BQ13459 2157 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 CCDC169A6NNP5 214 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 H0YCG3 227 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 K7ERI5 159 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 PLCG1P19174 1290 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 IBSPP21815 317 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 SCP2P22307 547 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 GLRA2P23416 452 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 GUCY2CP25092 1073 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 ABCD1P33897 745 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 STAT6P42226 847 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 RABGGTBP53611 331 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 DEFB103AP81534 67 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 DMP1Q13316 513 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 PKP1Q13835 747 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 MAPK6Q16659 721 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 TMEM119Q4V9L6 283 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 SPECC1Q5M775 1068 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 TWF2Q6IBS0 349 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 C1orf186Q6ZWK4 172 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 RTN4RL1Q86UN2 441 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 ABI1Q8IZP0 508 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 DEFB123Q8N688 67 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 IQUBQ8NA54 791 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 CNNM3Q8NE01 707 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 TMEM40Q8WWA1 233 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 RSPH1Q8WYR4 309 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 LARP4BQ92615 738 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 RAD54LQ92698 747 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 PGBD4Q96DM1 585 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 CCDC34Q96HJ3 373 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 PANK2Q9BZ23 570 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 SEMA6BQ9H3T3 888 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms