RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 TTI2Q6NXR4 508 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 FBXO46Q6PJ61 603 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 FOXR2Q6PJQ5 311 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 STXBP4Q6ZWJ1 553 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 HAUS6Q7Z4H7 955 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 LRRC71Q8N4P6 559 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 PRPF31Q8WWY3 499 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 PSPC1Q8WXF1 523 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 IFT74Q96LB3 600 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 TSEN34Q9BSV6 310 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 HSD3B7Q9H2F3 369 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 KCTD10Q9H3F6 313 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 SUGCTQ9HAC7 445 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 KMT5AQ9NQR1 393 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 ARHGAP28Q9P2N2 729 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 ADGRA3Q8IWK6 1321 aa10.57□□□□□ -0.72
CACNA1A-223ENST00000636058 ZMYM2Q9UBW7 1377 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 BICDL2A1A5D9 508 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CCDC169A6NNP5 214 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 H0YCG3 227 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 SLC16A4O15374 487 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CABYRO75952 493 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 PRPF6O94906 941 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CCL5P13501 91 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 SCP2P22307 547 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 ABCD1P33897 745 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 DNM2P50570 870 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CLCN3P51790 818 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 LRRC63Q05C16 580 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 KCNA1Q09470 495 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 CAPSQ13938 189 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 MXD4Q14582 209 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 MTFR1Q15390 333 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 KNOP1Q1ED39 458 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 L1TD1Q5T7N2 865 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 NFRKBQ6P4R8 1299 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 SESTD1Q86VW0 696 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 NELFCDQ8IXH7 590 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 C7orf31Q8N865 590 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 ARRDC4Q8NCT1 418 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 HVCN1Q96D96 273 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 DUSP9Q99956 384 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 HDAC6Q9UBN7 1215 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 GTF2IRD1Q9UHL9 959 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 NFE2L3Q9Y4A8 694 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 KAT6AQ92794 2004 aa10.56□□□□□ -0.72
CACNA1A-223ENST00000636058 EVPLQ92817 2033 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 SMIM35A0A1B0GVV1 85 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 DENND3A2RUS2 1198 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 PDXKO00764 312 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 ASAP2O43150 1006 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 GNAT1P11488 350 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 ZNF18P17022 549 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 TMOD1P28289 359 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 POU5F1BQ06416 359 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 LAMTOR4Q0VGL1 99 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 CDCA2Q69YH5 1023 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 RHPN2Q8IUC4 686 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 KIAA0319LQ8IZA0 1049 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 PPP1R13LQ8WUF5 828 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 ARMC5Q96C12 935 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 ZNF333Q96JL9 665 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 TYW1Q9NV66 732 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 FANCLQ9NW38 375 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 TBX20Q9UMR3 447 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 PHF24Q9UPV7 400 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 TRAF3IP3Q9Y228 551 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 GRIN2DO15399 1336 aa10.55□□□□□ -0.72
CACNA1A-223ENST00000636058 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 DNM1LO00429 736 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 TREHO43280 583 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 TGFB1I1O43294 461 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 GJB1P08034 283 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 CYP2C9P11712 490 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 CENPFP49454 3210 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 TPM4P67936 248 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 ZNF200P98182 395 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 TFDP1Q14186 410 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 NFIL3Q16649 462 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 EDRF1Q3B7T1 1238 aa10.54□□□□□ -0.72
CACNA1A-223ENST00000636058 CDKAL1Q5VV42 579 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms