RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SNTNA6NMZ2 147 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 GFPT2O94808 682 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PCYT1AP49585 367 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PLTPP55058 493 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TRIM71Q2Q1W2 868 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MIGA2Q7L4E1 593 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 KRT77Q7Z794 578 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TBC1D1Q86TI0 1168 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 KATNAL1Q9BW62 490 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ZFYVE1Q9HBF4 777 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 GINM1Q9NU53 330 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 INTUQ9ULD6 942 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SGSM2O43147 1006 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 VAMP4O75379 141 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 GDF11O95390 407 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SERPING1P05155 500 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 DARSP14868 501 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 CDC42EP1Q00587 391 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TRADDQ15628 312 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MAN2A1Q16706 1144 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SNX30Q5VWJ9 437 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MCPH1Q8NEM0 835 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TMC2Q8TDI7 906 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 VMP1Q96GC9 406 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 DISP3Q9P2K9 1392 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 DFFAO00273 331 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ASAP2O43150 1006 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TBXAS1P24557 533 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ARL4CP56559 192 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TMPRSS15P98073 1019 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 GABPB1Q06547 395 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 NR1H3Q13133 447 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ZKSCAN8Q15776 578 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 BBS9Q3SYG4 887 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 DDIASQ8IXT1 998 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ARL8AQ96BM9 186 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SUCLG2Q96I99 432 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 FMO2Q99518 471 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 XPO4Q9C0E2 1151 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TMEM245Q9H330 911 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SCUBE2Q9NQ36 999 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 EVA1BQ9NVM1 165 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SLC25A13Q9UJS0 675 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 DIS3Q9Y2L1 958 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 HEY1Q9Y5J3 304 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 NEURL1BA8MQ27 555 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PSMD3O43242 534 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 TLR2O60603 784 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MLNP12872 115 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 BRAFP15056 766 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PFKFB1P16118 471 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 NUP62P37198 522 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PEX19P40855 299 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 EIF3BP55884 814 aaKnown RBP5.9□□□□□ -1.46
SCN1A-209ENST00000635750 SPARCL1Q14515 664 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MAPRE2Q15555 327 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 CATSPER3Q86XQ3 398 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF555Q8NEP9 628 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 PGBD4Q96DM1 585 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 MAD2L2Q9UI95 211 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 FBXL5Q9UKA1 691 aa5.9□□□□□ -1.46
SCN1A-209ENST00000635750 ERN1O75460 977 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 TOMM70O94826 608 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 WDR47O94967 919 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 CDH2P19022 906 aaPredicted RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 HSD17B4P51659 736 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 COPB1P53618 953 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 MRPS15P82914 257 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 KRT17Q04695 432 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ADCY2Q08462 1091 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 MTMR1Q13613 665 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ZSCAN26Q16670 478 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ENGASEQ8NFI3 743 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 OR6P1Q8NGX9 317 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PPP1R2P1Q96PQ5 205 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ADA2Q9NZK5 511 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 FEM1BQ9UK73 627 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 RNF103-CHMP3A0A140T963 221 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PODXLO00592 558 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 MAP3K13O43283 966 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 EIF2S1P05198 315 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 KCNA2P16389 499 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PMS1P54277 932 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 TFDP2Q14188 446 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 HEATR6Q6AI08 1181 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 RNF135Q8IUD6 432 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ARHGAP18Q8N392 663 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PALMDQ9NP74 551 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 DIABLOQ9NR28 239 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 RNF14Q9UBS8 474 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHB7Q9Y5E2 793 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 UBE4BO95155 1302 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 IL10P22301 178 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PSMA4P25789 261 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 RASGRF1Q13972 1273 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 KCNV1Q6PIU1 500 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 USP17L2Q6R6M4 530 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 TRIM69Q86WT6 500 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms