RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ACAP3Q96P50 834 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 DDX50Q9BQ39 737 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 ROBO2Q9HCK4 1378 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 CHUKO15111 745 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 JAK2O60674 1132 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 ABCE1P61221 599 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 UBE4BO95155 1302 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 PPP6R2O75170 966 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 Q3C1V9 767 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 TCF3P15923 654 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 TBC1D9BQ66K14 1250 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 CENPPQ6IPU0 288 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 GRIN3BO60391 1043 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 GFPT2O94808 682 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 B4GALNT2Q8NHY0 566 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 RMDN2Q96LZ7 410 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 PSMA4P25789 261 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 BBS9Q3SYG4 887 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 CHD4Q14839 1912 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 MIF4GDA9UHW6 222 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 NDUFA8P51970 172 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 HSPH1Q92598 858 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 STAMQ92783 540 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 MSTO1Q9BUK6 570 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 DIAPH2O60879 1101 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 MYBL1P10243 752 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 DOK7Q18PE1 504 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 KRT24Q2M2I5 525 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 ERFEQ4G0M1 354 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 MEI1Q5TIA1 1274 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PLD3Q8IV08 490 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PCDHA7Q9UN72 937 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 CLTCQ00610 1675 aaKnown RBP14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 C2orf54Q08AI8 447 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 RRM2BQ7LG56 351 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 SH3KBP1Q96B97 665 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 KRCC1Q9NPI7 259 aaPredicted RBP14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 SH3GLB2Q9NR46 395 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 ATG3Q9NT62 314 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 KLHL8Q9P2G9 620 aaPredicted RBP14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PJA2O43164 708 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 KRT7P08729 469 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 CEP55Q53EZ4 464 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PKD2L2Q9NZM6 624 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 CAMSAP1Q5T5Y3 1602 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 VGLL3A8MV65 326 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 RASA4BC9J798 803 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 CCDC188H7C350 402 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PRPF4O43172 522 aaKnown RBP eCLIP14.02□□□□□ -0.163e-9■■■■■ 30.9
SYNGAP1-208ENST00000629380 RASA4O43374 803 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 SERPINB4P48594 390 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 NAALADL2Q58DX5 795 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF556Q9HAH1 456 aa14.02□□□□□ -0.16
SYNGAP1-208ENST00000629380 PHKA2P46019 1235 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 BLVRAP53004 296 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 NHEJ1Q9H9Q4 299 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 GPR108Q9NPR9 543 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 SEPT3Q9UH03 358 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 RNF103-CHMP3A0A140T963 221 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 TRADDQ15628 312 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 KANSL2Q9H9L4 492 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 FMNL1O95466 1100 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 DEFA1P59665 94 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 DEFA3P59666 94 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 E2F5Q15329 346 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 PCDHGB4Q9UN71 923 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 ATP11BQ9Y2G3 1177 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 CATSPER3Q86XQ3 398 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 ADA2Q9NZK5 511 aa14.02□□□□□ -0.17
SYNGAP1-208ENST00000629380 SLCO1A2P46721 670 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 PROM2Q8N271 834 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 CYTH2Q99418 400 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 MRPS26Q9BYN8 205 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 AP3B1O00203 1094 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 FOXP2O15409 715 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 DNAJC6O75061 913 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 CCDC24Q8N4L8 307 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 TOPORSQ9NS56 1045 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 ZBTB33Q86T24 672 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 C19orf60Q96EN9 201 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 SLC10A4Q96EP9 437 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 PCDHA13Q9Y5I0 950 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 IGSF1Q8N6C5 1336 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 ZAP70P43403 619 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 PSMD7P51665 324 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 GRAPQ13588 217 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 APOBEC3FQ8IUX4 373 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 GRAPLQ8TC17 118 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 PBXIP1Q96AQ6 731 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 FOPNLQ96NB1 174 aa14.01□□□□□ -0.17
SYNGAP1-208ENST00000629380 CLCA2Q9UQC9 943 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms