RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CHST13Q8NET6 341 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 RPL10LQ96L21 214 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 WDR92Q96MX6 357 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 TTC1Q99614 292 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 SOX7Q9BT81 388 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 ANO3Q9BYT9 981 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 AGO3Q9H9G7 860 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 VTA1Q9NP79 307 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 TOPORSQ9NS56 1045 aaPredicted RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 USP36Q9P275 1121 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 CNOT11Q9UKZ1 510 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 USP18Q9UMW8 372 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 EDARQ9UNE0 448 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 APOBEC2Q9Y235 224 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 VWA7Q9Y334 891 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 PCDHB6Q9Y5E3 794 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 PRSS38A1L453 326 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 ZNF623O75123 536 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 RAB11FIP3O75154 756 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 TOX4O94842 621 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 LPLP06858 475 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 PFKMP08237 780 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 ADRB1P08588 477 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 VIL1P09327 827 aaKnown RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 MSX2P35548 267 aaPredicted RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 MANFP55145 182 aaKnown RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 BPIFB4P59827 614 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 PPARAQ07869 468 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 RIN1Q13671 783 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 PDCD1Q15116 288 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 CLEC14AQ86T13 490 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 CMIPQ8IY22 773 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 TTC9BQ8N6N2 239 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 ANKRD53Q8N9V6 530 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 COG1Q8WTW3 980 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 GCDHQ92947 438 aaPredicted RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 SLC7A6OSQ96CW6 309 aaPredicted RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 TMEM176AQ96HP8 235 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 FDXACB1Q9BRP7 624 aaPredicted RBP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 KLC2Q9H0B6 622 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 DEF6Q9H4E7 631 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 TMPRSS11EQ9UL52 423 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 JAG2Q9Y219 1238 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 MYPNQ86TC9 1320 aa3.42□□□□□ -1.86
SCARNA4-201ENST00000629045 A0A1W2PRX2 142 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ZEB2O60315 1214 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 H2AFYO75367 372 aaKnown RBP3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 RAD17O75943 681 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 CLSTN1O94985 981 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 EYA4O95677 639 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 POU3F3P20264 500 aaPredicted RBP3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 COMTP21964 271 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 SELENOPP49908 381 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ADCY7P51828 1080 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ADAM8P78325 824 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 TRIM25Q14258 630 aaKnown RBP3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 CT83Q5H943 113 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 PITRM1Q5JRX3 1037 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ZNF662Q6ZS27 426 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 FRMD7Q6ZUT3 714 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 GAREM2Q75VX8 874 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 LYSMD2Q8IV50 215 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 CDYL2Q8N8U2 506 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 PIK3C3Q8NEB9 887 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 TGFBRAP1Q8WUH2 860 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 DVL3Q92997 716 aaPredicted RBP3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 HIST1H2AHQ96KK5 128 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ADOQ96SZ5 270 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 GPHA2Q96T91 129 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 HIST1H2AJQ99878 128 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 KCTD10Q9H3F6 313 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 NCDNQ9UBB6 729 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 NOC2LQ9Y3T9 749 aaKnown RBP3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 TCAF1Q9Y4C2 921 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 SLC30A1Q9Y6M5 507 aa3.41□□□□□ -1.86
SCARNA4-201ENST00000629045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 MUSKO15146 869 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 BRINP1O60477 761 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 SEC24DO94855 1032 aaPredicted RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 ACO1P21399 889 aaKnown RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 SESN2P58004 480 aaPredicted RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 SESN3P58005 492 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 CD69Q07108 199 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 MGAT5Q09328 741 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 FOXL1Q12952 345 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 GRM7Q14831 915 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 R3HDM1Q15032 1099 aaKnown RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 SPDYAQ5MJ70 313 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 KRT40Q6A162 431 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 IQSEC1Q6DN90 963 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 KRT26Q7Z3Y9 468 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 ADGRE4PQ86SQ3 457 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 RASSF3Q86WH2 238 aa3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 ZNF808Q8N4W9 903 aaPredicted RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 MSL3Q8N5Y2 521 aaKnown RBP3.4□□□□□ -1.87
SCARNA4-201ENST00000629045 PLA2G15Q8NCC3 412 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms