RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 RNF19AQ9NV58 838 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 SUCLA2Q9P2R7 463 aaPredicted RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 GAS2O43903 313 aaKnown RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 LPXNO60711 386 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 AMHP03971 560 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 FGFR4P22455 802 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 TMOD1P28289 359 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 FAM189BP81408 668 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 TMEM119Q4V9L6 283 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 PRPF31Q8WWY3 499 aaKnown RBP12.38□□□□□ -0.43
DDX41-219ENST00000629036 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 BSNDQ8WZ55 320 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 RGS18Q9NS28 235 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 LRWD1Q9UFC0 647 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 MSRAQ9UJ68 235 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 COL4A3BPQ9Y5P4 624 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
DDX41-219ENST00000629036 TLL1O43897 1013 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 DGAT1O75907 488 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 GLRA2P23416 452 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 GRB10Q13322 594 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 CAPSQ13938 189 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 AMHR2Q16671 573 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 HAUS3Q68CZ6 603 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 FAM43BQ6ZT52 329 aaPredicted RBP12.37□□□□□ -0.43
DDX41-219ENST00000629036 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 RHPN2Q8IUC4 686 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 DAW1Q8N136 415 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
DDX41-219ENST00000629036 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 MTRQ99707 1265 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
DDX41-219ENST00000629036 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 FBXO2Q9UK22 296 aaPredicted RBP12.37□□□□□ -0.43
DDX41-219ENST00000629036 C5orf42Q9H799 3197 aa12.37□□□□□ -0.43
DDX41-219ENST00000629036 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 GPR182O15218 404 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 DGKIO75912 1065 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 EDN1P05305 212 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 GATMP50440 423 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ERVK-21P61565 698 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 MAPK7Q13164 816 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 AAK1Q2M2I8 961 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 ZNF598Q86UK7 904 aaKnown RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 NPAS4Q8IUM7 802 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 NLRP4Q96MN2 994 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ADAM2Q99965 735 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
DDX41-219ENST00000629036 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 INSL6Q9Y581 213 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 CITO14578 2027 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ANK1P16157 1881 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 ADGRA3Q8IWK6 1321 aa12.36□□□□□ -0.43
DDX41-219ENST00000629036 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 E9PMD0 336 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 UPP2O95045 317 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 CYP11B2P19099 503 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 DNM2P50570 870 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 PTENP60484 403 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 POU5F1BQ06416 359 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 NFX1Q12986 1120 aaKnown RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 EXOC8Q8IYI6 725 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 TCP11Q8WWU5 503 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDX41-219ENST00000629036 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 SNX27Q96L92 541 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms