RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CCDC34Q96HJ3 373 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 DRC1Q96MC2 740 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 REEP2Q9BRK0 252 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 C17orf75Q9HAS0 396 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 SIP14410 1827 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 DCDC2CA8MYV0 355 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 TLR3O15455 904 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 DNM2P50570 870 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 TLE2Q04725 743 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 EHHADHQ08426 723 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 FAAP100Q0VG06 881 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 DPYDQ12882 1025 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 PSPC1Q8WXF1 523 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 MAP7D2Q96T17 732 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 GPRC5CQ9NQ84 441 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 TBX21Q9UL17 535 aa10.91□□□□□ -0.66
SOX2-OT-249ENST00000628810 NPHP3-ACAD11A0A0J9YXS1 232 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 PVALEFA0A1B0GWK0 134 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 TK2O00142 265 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 ASAP2O43150 1006 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 HIP1RO75146 1068 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CLTBP09497 229 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 GLRA2P23416 452 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 AFMP43652 599 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 POU5F1BQ06416 359 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 MGAT3Q09327 533 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CUL4BQ13620 913 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 DHX8Q14562 1220 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 MXD4Q14582 209 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 POSTNQ15063 836 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 KLHL40Q2TBA0 621 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 NT5DC1Q5TFE4 455 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CDCA2Q69YH5 1023 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 UNC13DQ70J99 1090 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 RSPH3Q86UC2 560 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 ZNF410Q86VK4 478 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 GRAMD1CQ8IYS0 662 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 METTL13Q8N6R0 699 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 ASAP3Q8TDY4 903 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 PRPF31Q8WWY3 499 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 STAMQ92783 540 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 TMEM143Q96AN5 459 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 NFKBIZQ9BYH8 718 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 CLSTN2Q9H4D0 955 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 SUGCTQ9HAC7 445 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 PARVGQ9HBI0 331 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 OLFML3Q9NRN5 406 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 HOOK1Q9UJC3 728 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 ATP11BQ9Y2G3 1177 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 COL4A3BPQ9Y5P4 624 aa10.9□□□□□ -0.66
SOX2-OT-249ENST00000628810 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 KLRC4O43908 158 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 GPR32O75388 356 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 PLS3P13797 630 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 GAP43P17677 238 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 SCP2P22307 547 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 NAMPTP43490 491 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 GPC3P51654 580 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 ASIC1P78348 528 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 LAMTOR4Q0VGL1 99 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 BFSP2Q13515 415 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 CAPSQ13938 189 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 PPP2R5AQ15172 486 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 NFKBIBQ15653 356 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM102BQ5T8I3 360 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 ADGRD1Q6QNK2 874 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 DYMQ7RTS9 669 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 FIZ1Q96SL8 496 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 NOC4LQ9BVI4 516 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM49AQ9H0Q0 323 aaPredicted RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 ADAMTS10Q9H324 1103 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 LARSQ9P2J5 1176 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 KCNG1Q9UIX4 513 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 AKT3Q9Y243 479 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 KAT6AQ92794 2004 aa10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 MKI67P46013 3256 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-249ENST00000628810 LTBP2Q14767 1821 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms