RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 USP37Q86T82 979 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 DPF3Q92784 378 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZNF446Q9NWS9 450 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 KLRC4O43908 158 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 IRF2BP1Q8IU81 584 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ATP8B4Q8TF62 1192 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ARID3AQ99856 593 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZBTB39O15060 712 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ARIH2O95376 493 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 SLC26A2P50443 739 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 CETN1Q12798 172 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 PAK1Q13153 545 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 OLFML2BQ68BL8 750 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 V9GYY5 206 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 IGLV3-22A0A075B6J6 115 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 A0A0U1RQJ8 604 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 CETN3O15182 167 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 SLU7O95391 586 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 KCNA2P16389 499 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 THPOP40225 353 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 PHKA2P46019 1235 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 PSMC6P62333 389 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 PDE4CQ08493 712 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 TRIM14Q14142 442 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 MTF1Q14872 753 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 ARHGAP29Q52LW3 1261 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 POMGNT1Q8WZA1 660 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 BAG1Q99933 345 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 UNC93B1Q9H1C4 597 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 PRPF6O94906 941 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 SLITRK3O94933 977 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCL5P13501 91 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 GRB10Q13322 594 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 MAPK6Q16659 721 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 BCAS3Q9H6U6 928 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 MORN1Q5T089 497 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 SPOUT1Q5T280 376 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 NFASCO94856 1347 aa13.63□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZBBXA8MT70 800 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCNE2O96020 404 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 ASGR1P07306 291 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 OSTNP61366 133 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 ELF2Q15723 593 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 GRIK4Q16099 956 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 KCNA10Q16322 511 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 CNGA4Q8IV77 575 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 WDR24Q96S15 920 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 GYPCP04921 128 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 NLRP11P59045 1033 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 BIRC3Q13489 604 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 TWF2Q6IBS0 349 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 FBXO46Q6PJ61 603 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 C4orf19Q8IY42 314 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 NELFBQ8WX92 580 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 PANX2Q96RD6 677 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 DENND3A2RUS2 1198 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 KIF5CO60282 957 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 ICAM3P32942 547 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZNF484Q5JVG2 852 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 IER5Q5VY09 327 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 GPR20Q99678 358 aa13.62□□□□□ -0.23
SYNGAP1-207ENST00000628646 MMP3P08254 477 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 RBL2Q08999 1139 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 AKR1B15C9JRZ8 316 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 RFC5P40937 340 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 SOX10P56693 466 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 VTNP04004 478 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 PMS1P54277 932 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 SP2Q02086 613 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms