RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 SFPQP23246 707 aaKnown RBP eCLIP18.4■□□□□ 0.54
LINC00628-201ENST00000628516 NDUFV1P49821 464 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 FOSBP53539 338 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 NPEPPSP55786 919 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 ADAM15Q13444 863 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 EPHA7Q15375 998 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 NCAPH2Q6IBW4 605 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
LINC00628-201ENST00000628516 ZNF410Q86VK4 478 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 CEP170P1Q96L14 293 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 INO80BQ9C086 356 aaPredicted RBP18.4■□□□□ 0.54
LINC00628-201ENST00000628516 PCDHGC5Q9Y5F6 944 aa18.4■□□□□ 0.54
LINC00628-201ENST00000628516 A0A0U1RQF3 1178 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 JAK2O60674 1132 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 NRIP1P48552 1158 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 LRRC55Q6ZSA7 311 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 KSR1Q8IVT5 923 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 SLFN12Q8IYM2 578 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 LRRC43Q8N309 656 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 TNFRSF25Q93038 417 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 NLRP4Q96MN2 994 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 LXNQ9BS40 222 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 TLR9Q9NR96 1032 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 RGL1Q9NZL6 768 aa18.39■□□□□ 0.53
LINC00628-201ENST00000628516 WRAP73Q9P2S5 460 aaPredicted RBP18.39■□□□□ 0.53
LINC00628-201ENST00000628516 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 MBTPS2O43462 519 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 EOMESO95936 686 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 POLGP54098 1239 aaPredicted RBP18.38■□□□□ 0.53
LINC00628-201ENST00000628516 TRIM29Q14134 588 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 CLLU1OSQ5K130 101 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
LINC00628-201ENST00000628516 C4orf19Q8IY42 314 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 EFHBQ8N7U6 833 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 ZNF579Q8NAF0 562 aaKnown RBP18.38■□□□□ 0.53
LINC00628-201ENST00000628516 HELQQ8TDG4 1101 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 DYDC2Q96IM9 177 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 TLE6Q9H808 572 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 CD207Q9UJ71 328 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 LIMCH1Q9UPQ0 1083 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
LINC00628-201ENST00000628516 PPME1Q9Y570 386 aa18.38■□□□□ 0.53
LINC00628-201ENST00000628516 BTBD18B2RXH4 712 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 PI4K2BG5E9Z4 385 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 YWHABP31946 246 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 ERVFC1P60507 584 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 CYP4A11Q02928 519 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 SMAD4Q13485 552 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 CTTNQ14247 550 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 SMAD2Q15796 467 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 KCNT2Q6UVM3 1135 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 OTUD6AQ7L8S5 288 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 CATSPER4Q7RTX7 472 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 ZNF598Q86UK7 904 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 DIS3L2Q8IYB7 885 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 EXOC8Q8IYI6 725 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 ZNF558Q96NG5 402 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 DHX33Q9H6R0 707 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 ZSWIM4Q9H7M6 989 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 BMP2KQ9NSY1 1161 aaPredicted RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 PRKAG3Q9UGI9 489 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 RAPGEFL1Q9UHV5 662 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
LINC00628-201ENST00000628516 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 C5orf42Q9H799 3197 aa18.37■□□□□ 0.53
LINC00628-201ENST00000628516 PER2O15055 1255 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 ST18O60284 1047 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 ATF7P17544 494 aaPredicted RBP18.36■□□□□ 0.53
LINC00628-201ENST00000628516 PBX3P40426 434 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 RFC5P40937 340 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 PHKA2P46019 1235 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 PLCB3Q01970 1234 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 ZP2Q05996 745 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 SPIRE1Q08AE8 756 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 CALCRLQ16602 461 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 XKR9Q5GH70 373 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 TMEM31Q5JXX7 168 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 TPH2Q8IWU9 490 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 ADHFE1Q8IWW8 467 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 MRPS27Q92552 414 aaKnown RBP18.36■□□□□ 0.53
LINC00628-201ENST00000628516 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
LINC00628-201ENST00000628516 ZBTB39O15060 712 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 PPM1AP35813 382 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 KRT17Q04695 432 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 ST3GAL1Q11201 340 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 PLPP4Q5VZY2 271 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 PDE12Q6L8Q7 609 aaKnown RBP18.35■□□□□ 0.53
LINC00628-201ENST00000628516 PRPF31Q8WWY3 499 aaKnown RBP18.35■□□□□ 0.53
LINC00628-201ENST00000628516 PSPC1Q8WXF1 523 aaKnown RBP18.35■□□□□ 0.53
LINC00628-201ENST00000628516 MSLNLQ96KJ4 702 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 LRFN3Q9BTN0 628 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
LINC00628-201ENST00000628516 IFT122Q9HBG6 1241 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 ENTPD7Q9NQZ7 604 aa18.35■□□□□ 0.53
LINC00628-201ENST00000628516 CLEC1BQ9P126 229 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms