RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 GOLPH3LQ9H4A5 285 aa9.5□□□□□ -0.89
GABRB3-216ENST00000628124 SMARCAD1Q9H4L7 1026 aa9.5□□□□□ -0.89
GABRB3-216ENST00000628124 SARS2Q9NP81 518 aaKnown RBP9.5□□□□□ -0.89
GABRB3-216ENST00000628124 ADAM22Q9P0K1 906 aa9.5□□□□□ -0.89
GABRB3-216ENST00000628124 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
GABRB3-216ENST00000628124 MAP4P27816 1152 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 SDC4P31431 198 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 EIF4A3P38919 411 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 PSMD7P51665 324 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 NDUFA8P51970 172 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 CDO1Q16878 200 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 PRUNE1Q86TP1 453 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 MCPH1Q8NEM0 835 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 NHEJ1Q9H9Q4 299 aaPredicted RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ARHGEF10O15013 1369 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 XDHP47989 1333 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 DIAPH2O60879 1101 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 A1BGP04217 495 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 PHKA2P46019 1235 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 EFHC2Q5JST6 749 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 HEATR6Q6AI08 1181 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 LRRC8EQ6NSJ5 796 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ASAP3Q8TDY4 903 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 POLR3EQ9NVU0 708 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 FBXO40Q9UH90 709 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 DCDC2Q9UHG0 476 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 MRFAP1Q9Y605 127 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ANGPT2O15123 496 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 FMNL1O95466 1100 aaPredicted RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 HNRNPCP07910 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 BEND6Q5SZJ8 279 aaPredicted RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 DNAJC10Q8IXB1 793 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 PANX2Q96RD6 677 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 ZSWIM6Q9HCJ5 1215 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 TMEM63CQ9P1W3 806 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 NRBP1Q9UHY1 535 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 PIK3C2GO75747 1445 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 CLIC2O15247 247 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 TBC1D4O60343 1298 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 GSPT1P15170 499 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 SCNN1DP51172 638 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 GUCY1A3Q02108 690 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 HORMAD1Q86X24 394 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 DDIASQ8IXT1 998 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 WWP1Q9H0M0 922 aa9.49□□□□□ -0.89
GABRB3-216ENST00000628124 GEMIN8Q9NWZ8 242 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 DDX56Q9NY93 547 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 C6orf203Q9P0P8 240 aaPredicted RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 RPRD2Q5VT52 1461 aaKnown RBP9.49□□□□□ -0.89
GABRB3-216ENST00000628124 FOXP2O15409 715 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 PSMD3O43242 534 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 TBXAS1P24557 533 aaPredicted RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 BCAMP50895 628 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 CC2D1AQ6P1N0 951 aaPredicted RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ECT2Q9H8V3 914 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 TBC1D23Q9NUY8 699 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ABCC1P33527 1531 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 CYBBP04839 570 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 HMOX2P30519 316 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 DDIT3P35638 169 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 KYAT1Q16773 422 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SYDE2Q5VT97 1194 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SCARA5Q6ZMJ2 495 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 CFAP69A5D8W1 941 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 KRT75O95678 551 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 FGGP02679 453 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 RALAP11233 206 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 FBLN1P23142 703 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 HPCAP84074 193 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ANGPT1Q15389 498 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 DCAF4L1Q3SXM0 396 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SCN4BQ8IWT1 228 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ZNF280CQ8ND82 737 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 FAM161BQ96MY7 647 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SEPT3Q9UH03 358 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 NBNO60934 754 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 NDUFA10O95299 355 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 KRT24Q2M2I5 525 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 G2E3Q7L622 706 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 RASSF3Q86WH2 238 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 ATP11CQ8NB49 1132 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 CLIC6Q96NY7 704 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SH3GL3Q99963 347 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 SPATA16Q9BXB7 569 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 PAIP2BQ9ULR5 123 aaKnown RBP9.48□□□□□ -0.89
GABRB3-216ENST00000628124 MTMR6Q9Y217 621 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 MAP3K19Q56UN5 1328 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 H0Y3Z8 333 aa9.48□□□□□ -0.89
GABRB3-216ENST00000628124 NPM3O75607 178 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms