RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 FBXO40Q9UH90 709 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SALL4Q9UJQ4 1053 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 CAPN6Q9Y6Q1 641 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 PFASO15067 1338 aa21.45■■□□□ 1.02
CHRNA4-209ENST00000627000 RBAK-RBAKDNI3L0D1 243 aa21.45■■□□□ 1.02
CHRNA4-209ENST00000627000 NPTX2P47972 431 aa21.45■■□□□ 1.02
CHRNA4-209ENST00000627000 DLG4P78352 724 aa21.45■■□□□ 1.02
CHRNA4-209ENST00000627000 BFSP1Q12934 665 aa21.45■■□□□ 1.02
CHRNA4-209ENST00000627000 A0A087X0T9 212 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 CXCL11O14625 94 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 MOCS3O95396 460 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 SUPT20HL2P0C7V6 817 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 FAM228BP0C875 321 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 PNMA6AP0CW24 399 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 H2AFXP16104 143 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 ICAM3P32942 547 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 MYBPC2Q14324 1141 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 PPP2R5AQ15172 486 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 IQCEQ6IPM2 695 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 TRAPPC11Q7Z392 1133 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 TMEM161BQ8NDZ6 487 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 TXNRD2Q9NNW7 524 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 XPNPEP1Q9NQW7 623 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 MYH10P35580 1976 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 POTEB2H3BUK9 544 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 CHMP4BP1P59074 171 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 TUBB2AQ13885 445 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 EAPPQ56P03 285 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 MIS18BP1Q6P0N0 1132 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 OPTNQ96CV9 577 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 TUBB2BQ9BVA1 445 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 HSPBP1Q9NZL4 362 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 ADAMTS1Q9UHI8 967 aa21.44■■□□□ 1.02
CHRNA4-209ENST00000627000 PJA2O43164 708 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 SRGAP2O75044 1071 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 JAM2P57087 298 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 PTK2Q05397 1052 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 MOGSQ13724 837 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 CEP112Q8N8E3 955 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 GOLGA1Q92805 767 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 PDLIM7Q9NR12 457 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 KCNH4Q9UQ05 1017 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 ANKRD63C9JTQ0 380 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 DKC1O60832 514 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 ZSCAN20P17040 1043 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 ATP4AP20648 1035 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 DMP1Q13316 513 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 SLC18A3Q16572 532 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 PAPD7Q5XG87 772 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 ZNF571Q7Z3V5 609 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 C12orf56Q8IXR9 622 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 KMT5AQ9NQR1 393 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 CYP26B1Q9NR63 512 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 FBXL5Q9UKA1 691 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 TBX20Q9UMR3 447 aa21.43■■□□□ 1.02
CHRNA4-209ENST00000627000 SYNGAP1Q96PV0 1343 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 IGSF9BQ9UPX0 1349 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 PPIL2Q13356 520 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 WHAMMP3Q1A5X7 153 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 Q3C1V9 767 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 MTERF2Q49AM1 385 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 XXYLT1Q8NBI6 393 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 PLEKHO2Q8TD55 490 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 ADGRA3Q8IWK6 1321 aa21.42■■□□□ 1.02
CHRNA4-209ENST00000627000 DENND3A2RUS2 1198 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 GOLGA8IPA6NC78 632 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 GOLGA8JA6NMD2 632 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 UBA1P22314 1058 aaKnown RBP21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 EDNRBP24530 442 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 SMTNP53814 917 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 MYL7Q01449 175 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 EEPD1Q7L9B9 569 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 KIFAP3Q92845 792 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 RBPJLQ9UBG7 517 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 DGAT1O75907 488 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 ATG7O95352 703 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 KRT13P13646 458 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 ADSSP30520 456 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 TMEM174Q8WUU8 243 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 PACSIN1Q9BY11 444 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 INTS2Q9H0H0 1204 aaKnown RBP21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 SAR1BQ9Y6B6 198 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 EMSYQ7Z589 1322 aa21.41■■□□□ 1.02
CHRNA4-209ENST00000627000 BUB1O43683 1085 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 LRRN2O75325 713 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 PGK2P07205 417 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 CLCN6P51797 869 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 VAMP7P51809 220 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 PPP3CAQ08209 521 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 XKR3Q5GH77 459 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 C1orf220Q5T0J3 134 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 INTS8Q75QN2 995 aaKnown RBP21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 MAP4K3Q8IVH8 894 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 RABGGTAQ92696 567 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 ZNF302Q9NR11 478 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 LRRC37A2A6NM11 1700 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 TACC1O75410 805 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms