RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DDX20Q9UHI6 824 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 AGAP1Q9UPQ3 857 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 TACC3Q9Y6A5 838 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 NHSL1Q5SYE7 1610 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 NSFP46459 744 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 KRT83P78385 493 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 HLTFQ14527 1009 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CCL14Q16627 93 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RDM1Q8NG50 284 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CNOT6LQ96LI5 555 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RNPC3Q96LT9 517 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 COLEC11Q9BWP8 271 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 TMEM60Q9H2L4 133 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 GUCA1BQ9UMX6 200 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 TACC1O75410 805 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 GNRH1P01148 92 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 FGFR4P22455 802 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 ARL1P40616 181 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-229ENST00000622668 PDIA5Q14554 519 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 KCNA10Q16322 511 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 MGAT5BQ3V5L5 792 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 UNC13DQ70J99 1090 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 TAX1BP1Q86VP1 789 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-229ENST00000622668 TRPC7Q9HCX4 862 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 GPRC5CQ9NQ84 441 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 ARGLU1Q9NWB6 273 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-229ENST00000622668 RBPJLQ9UBG7 517 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SEL1LQ9UBV2 794 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 TLL1O43897 1013 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 RNF8O76064 485 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 BPIFB4P59827 614 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 GNG11P61952 73 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 FANCCQ00597 558 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 NBPF20Q3BBV1 942 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 WDR72Q3MJ13 1102 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 OR6B2Q6IFH4 312 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 U2AF1L4Q8WU68 220 aaKnown RBP9.84□□□□□ -0.83
HDAC9-229ENST00000622668 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SYNPO2Q9UMS6 1093 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SYNGAP1Q96PV0 1343 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 NPHP3-ACAD11A0A0J9YXS1 232 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 KRT86O43790 486 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 SLC37A4O43826 429 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 ITKQ08881 620 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
HDAC9-229ENST00000622668 CCDC186Q7Z3E2 898 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 HASPINQ8TF76 798 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 PAGE5Q96GU1 130 aa9.84□□□□□ -0.83
HDAC9-229ENST00000622668 IGF2BP3O00425 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 GJB1P08034 283 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 CACNB2Q08289 660 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA8FQ08AF8 430 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA8DPQ0D2H9 430 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 COASYQ13057 564 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 CUL4BQ13620 913 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 PPP2R5DQ14738 602 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 HSP90B2PQ58FF3 399 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 TRIML1Q8N9V2 468 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 MAML3Q96JK9 1138 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF830Q96NB3 372 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 PPP1R9BQ96SB3 815 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 ANKEF1Q9NU02 776 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 SLC38A7Q9NVC3 462 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 CPSF3Q9UKF6 684 aaKnown RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 POMCP01189 267 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 AFPP02771 609 aaKnown RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 MYL1P05976 194 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 XRCC6P12956 609 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 C4orf50Q6ZRC1 276 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 INTS8Q75QN2 995 aaKnown RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 PGBD3Q8N328 593 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 DHTKD1Q96HY7 919 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF512Q96ME7 567 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 ADAM2Q99965 735 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 CERS4Q9HA82 394 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 AGO4Q9HCK5 861 aaKnown RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 UBE2TQ9NPD8 197 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 HDAC6Q9UBN7 1215 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 AKR1B15C9JRZ8 316 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 RPA1P27694 616 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 BCAR1P56945 870 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 FBXO46Q6PJ61 603 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-229ENST00000622668 TUBGCP2Q9BSJ2 902 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 FAN1Q9Y2M0 1017 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 DOT1LQ8TEK3 1739 aa9.83□□□□□ -0.84
HDAC9-229ENST00000622668 GAS2O43903 313 aaKnown RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 DUSP11O75319 330 aaKnown RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 LRG1P02750 347 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 NR3C1P04150 777 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 ALDH2P05091 517 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 HOXA7P31268 230 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms