RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 GPBP1Q86WP2 473 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
LITAF-221ENST00000622633 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
LITAF-221ENST00000622633 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 SERPINB13Q9UIV8 391 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 BTAF1O14981 1849 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 ZBTB5O15062 677 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 EVI5O60447 810 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 SERPING1P05155 500 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 SHMT1P34896 483 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 STAT3P40763 770 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 SCNN1DP51172 638 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 CCNG1P51959 295 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.26
LITAF-221ENST00000622633 SEPT2Q15019 361 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.26
LITAF-221ENST00000622633 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.46□□□□□ -0.26
LITAF-221ENST00000622633 PCDHA2Q9Y5H9 948 aa13.46□□□□□ -0.26
LITAF-221ENST00000622633 PALMO75781 387 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 CERS5Q8N5B7 392 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 P3H4Q92791 437 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 SEC16BQ96JE7 1060 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.45□□□□□ -0.26
LITAF-221ENST00000622633 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 TRPV5Q9NQA5 729 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 STIM2Q9P246 746 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 TMCO1Q9UM00 188 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 RBAK-RBAKDNI3L0D1 243 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 FTCDO95954 541 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 GYS1P13807 737 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 ALOX15P16050 662 aaPredicted RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 RNF220Q5VTB9 566 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 FOXR2Q6PJQ5 311 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 MAEAQ7L5Y9 396 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 TRIM59Q8IWR1 403 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 CCDC63Q8NA47 563 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 ATP11CQ8NB49 1132 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
LITAF-221ENST00000622633 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
LITAF-221ENST00000622633 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
LITAF-221ENST00000622633 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 FAM200BP0CF97 657 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 KLRC1P26715 233 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 CA8P35219 290 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 TAF11Q15544 211 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 HYIQ5T013 277 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 HOOK3Q86VS8 718 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 SLC15A3Q8IY34 581 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 IFT43Q96FT9 208 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 PPANQ9NQ55 473 aaKnown RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 A0A087X0T9 212 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 MED24O75448 989 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 FAM228BP0C875 321 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 NR1D1P20393 614 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 CCND1P24385 295 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 SESN3P58005 492 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 RNASE9P60153 205 aaKnown RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 NAB2Q15742 525 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 CCDC92Q53HC0 331 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 PACSIN1Q9BY11 444 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 OXCT2Q9BYC2 517 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 KCTD10Q9H3F6 313 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 RHBDL2Q9NX52 303 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 LNPEPQ9UIQ6 1025 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 PACSIN2Q9UNF0 486 aaPredicted RBP13.44□□□□□ -0.26
LITAF-221ENST00000622633 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
LITAF-221ENST00000622633 KDM3AQ9Y4C1 1321 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 GNA14O95837 355 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 KRT14P02533 472 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 PHEXP78562 749 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 PLOD1Q02809 727 aaPredicted RBP13.43□□□□□ -0.26
LITAF-221ENST00000622633 SHROOM1Q2M3G4 852 aaPredicted RBP13.43□□□□□ -0.26
LITAF-221ENST00000622633 ARSHQ5FYA8 562 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
LITAF-221ENST00000622633 EXOC3L1Q86VI1 746 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 ZFPM1Q8IX07 1006 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms