RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF507Q8TCN5 953 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 LPIN2Q92539 896 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 ARHGEF2Q92974 986 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 MTMR8Q96EF0 704 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 EPSTI1Q96J88 318 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DPH5Q9H2P9 285 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 BTG4Q9NY30 223 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 RASAL2Q9UJF2 1139 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 HAO1Q9UJM8 370 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 EFR3BQ9Y2G0 817 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 UTP11Q9Y3A2 253 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 PDS5AQ29RF7 1337 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 MROH7Q68CQ1 1323 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 RGPD5Q99666 1765 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 ASMTLO95671 621 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 MYBP10242 640 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 TRPC1P48995 793 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 KLK7P49862 253 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TBX4P57082 545 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 PDE1BQ01064 536 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 GSTM4Q03013 218 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TTC5Q8N0Z6 440 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 CYP4X1Q8N118 509 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DCLK2Q8N568 766 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DEPTORQ8TB45 409 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 STMN2Q93045 179 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 SPACA7Q96KW9 195 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TBC1D10AQ9BXI6 508 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DENND2DQ9H6A0 471 aaPredicted RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 METTL5Q9NRN9 209 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 INIPQ9NRY2 104 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 USP20Q9Y2K6 914 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 MYH10P35580 1976 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 KCNK3O14649 394 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 LDHCP07864 332 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 RXRAP19793 462 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 EPHB2P29323 1055 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 TUFMP49411 452 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 CNGA2Q16280 664 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 SYDE2Q5VT97 1194 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 AGAP9Q5VTM2 703 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TOM1L2Q6ZVM7 507 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DAAM2Q86T65 1068 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 DIS3L2Q8IYB7 885 aaKnown RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 NLGN1Q8N2Q7 840 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 NCOA7Q8NI08 942 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 INPP5DQ92835 1189 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 SUCLG2Q96I99 432 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 FMO2Q99518 471 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 ZNF184Q99676 751 aaPredicted RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 MYD88Q99836 296 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 TUBGCP2Q9BSJ2 902 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 ASCC2Q9H1I8 757 aaPredicted RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 ADAM7Q9H2U9 754 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 PRDM11Q9NQV5 511 aa8.5□□□□□ -1.05
VPS11-209ENST00000622309 PACSIN2Q9UNF0 486 aaPredicted RBP8.5□□□□□ -1.05
VPS11-209ENST00000622309 MYH7BA7E2Y1 1941 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 SIGLEC16A6NMB1 481 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 CAPN9O14815 690 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 PRPF3O43395 683 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 LDHAP00338 332 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 PHKG2P15735 406 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 NFKBIAP25963 317 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 MTIF2P46199 727 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 TOB1P50616 345 aaPredicted RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 NEK2P51955 445 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 GPSM2P81274 684 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 AMPD3Q01432 767 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 NKX1-1Q15270 411 aaPredicted RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 PKN1Q16512 942 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 ZNF449Q6P9G9 518 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 CEP70Q8NHQ1 597 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 CEP295NLQ96MC4 621 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 INPP4AQ96PE3 977 aaPredicted RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 TUBGCP5Q96RT8 1024 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 EIF2AQ9BY44 585 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 TRIM31Q9BZY9 425 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 ZMYND12Q9H0C1 365 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 BABAM1Q9NWV8 329 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 SALL4Q9UJQ4 1053 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 RPL26L1Q9UNX3 145 aaKnown RBP8.49□□□□□ -1.05
VPS11-209ENST00000622309 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 TRIM49BA6NDI0 452 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 CCDC160A6NGH7 325 aa8.49□□□□□ -1.05
VPS11-209ENST00000622309 PDE5AO76074 875 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms