RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 MESDQ14696 234 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 DENND2CQ68D51 928 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 JAMLQ86YT9 394 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 TCRBV7S2A1N4TA0A589 114 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 CES2O00748 559 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 CLTAP09496 248 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 CCDC172P0C7W6 258 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 AGBL2Q5U5Z8 902 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 EPM2AIP1Q7L775 607 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 LRRC34Q8IZ02 419 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 ATXN2Q99700 1313 aaKnown RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 ATP2B4P23634 1241 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 FMO5P49326 533 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 GSCP56915 257 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 TBC1D1Q86TI0 1168 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 RFFLQ8WZ73 363 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 ALG6Q9Y672 507 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 PPP1R18Q6NYC8 613 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 N4BP2L2Q92802 583 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 FAM212AQ96EL1 285 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 C8orf37Q96NL8 207 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 EPB41L4BQ9H329 900 aa17.06■□□□□ 0.32
NPHP4-211ENST00000622020 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
NPHP4-211ENST00000622020 GAKO14976 1311 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 KIAA1755Q5JYT7 1200 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 NEK9Q8TD19 979 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.05■□□□□ 0.321e-11■■■■■ 94.4
NPHP4-211ENST00000622020 LENG9Q96B70 501 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 PSMC2P35998 433 aaKnown RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 PTENP60484 403 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DLG4P78352 724 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DDR1Q08345 913 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 INTS9Q9NV88 658 aaKnown RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 ANKRD63C9JTQ0 380 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 RPL21P46778 160 aaKnown RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 PHLDB3Q6NSJ2 640 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 PHLDB2Q86SQ0 1253 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 SYCP3Q8IZU3 236 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 CCDC197Q8NCU1 140 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 CCT6BQ92526 530 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 DNAJC18Q9H819 358 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 UBE2TQ9NPD8 197 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-211ENST00000622020 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
NPHP4-211ENST00000622020 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 G3V3G9 751 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 PPFIA2O75334 1257 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 TRIM37O94972 964 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 CFBP00751 764 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 FTLP02792 175 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-211ENST00000622020 CREB1P16220 341 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 DUPD1Q68J44 220 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 SLC30A5Q8TAD4 765 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 KAT5Q92993 513 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-211ENST00000622020 EXOC3O60645 756 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 LMNB1P20700 586 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 NF2P35240 595 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 SNX1Q13596 522 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
NPHP4-211ENST00000622020 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
NPHP4-211ENST00000622020 PABPC3Q9H361 631 aaKnown RBP17.04■□□□□ 0.32
NPHP4-211ENST00000622020 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-211ENST00000622020 TNRC6CQ9HCJ0 1690 aaKnown RBP17.03■□□□□ 0.32
NPHP4-211ENST00000622020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
NPHP4-211ENST00000622020 ACSL3O95573 720 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 KLRC3Q07444 240 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 TRIP13Q15645 432 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms