RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SCNN1BP51168 640 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 PLEKHG4Q58EX7 1191 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 ZBTB41Q5SVQ8 909 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-229ENST00000621897 GIMAP6Q6P9H5 292 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 AHI1Q8N157 1196 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 ANKRD53Q8N9V6 530 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 RABGGTAQ92696 567 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 GCDHQ92947 438 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-229ENST00000621897 LPPQ93052 612 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 SOX7Q9BT81 388 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 NELFAQ9H3P2 528 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 TMPRSS5Q9H3S3 457 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 MSRAQ9UJ68 235 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 A0A1W2PRX2 142 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 PLSCR1O15162 318 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 MYCLP1P12525 358 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-229ENST00000621897 BPIFB4P59827 614 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 CRIP3Q6Q6R5 217 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 ADGRE4PQ86SQ3 457 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 PASD1Q8IV76 773 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 PLA2G15Q8NCC3 412 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 OR2W6PQ8NHA6 318 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 LEO1Q8WVC0 666 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-229ENST00000621897 ZNF747Q9BV97 191 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 VPS11Q9H270 941 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 TLR9Q9NR96 1032 aa6.37□□□□□ -1.39
BRCA1-229ENST00000621897 HECAQ9UBI9 543 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-229ENST00000621897 PCDH8O95206 1070 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 FKBP9O95302 570 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 C6P13671 934 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 LSSP48449 732 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 GYS2P54840 703 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 IL2P60568 153 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 USP39Q53GS9 565 aaKnown RBP6.36□□□□□ -1.39
BRCA1-229ENST00000621897 SPTY2D1Q68D10 685 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-229ENST00000621897 RNF207Q6ZRF8 634 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 FKBP9P1Q75LS8 142 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 D2HGDHQ8N465 521 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 EXTL1Q92935 676 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 NOL10Q9BSC4 688 aaKnown RBP6.36□□□□□ -1.39
BRCA1-229ENST00000621897 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
BRCA1-229ENST00000621897 TLDC2A0PJX2 215 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 TOX4O94842 621 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 TACR2P21452 398 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 PHC1P78364 1004 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 SART3Q15020 963 aaKnown RBP6.35□□□□□ -1.39
BRCA1-229ENST00000621897 TERF2Q15554 542 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 GPR158Q5T848 1215 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 GAREM2Q75VX8 874 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 ZNF610Q8N9Z0 462 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 FAM89AQ96GI7 184 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 EMC7Q9NPA0 242 aa6.35□□□□□ -1.39
BRCA1-229ENST00000621897 MYPNQ86TC9 1320 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 PFKMP08237 780 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 ESPNLQ6ZVH7 1005 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 RNF180Q86T96 592 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 THNSL2Q86YJ6 484 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 IL17DQ8TAD2 202 aa6.34□□□□□ -1.39
BRCA1-229ENST00000621897 SCAND2PQ9GZW5 306 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-229ENST00000621897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.34□□□□□ -1.39
BRCA1-229ENST00000621897 USP36Q9P275 1121 aaKnown RBP6.34□□□□□ -1.39
BRCA1-229ENST00000621897 PRSS38A1L453 326 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 GOLGA8BA8MQT2 603 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 CAPN14A8MX76 684 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 AKAP8O43823 692 aaKnown RBP6.33□□□□□ -1.4
BRCA1-229ENST00000621897 VSIG10L2P0DP72 767 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 GAAP10253 952 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 ACRV1P26436 265 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 HIBADHP31937 336 aaKnown RBP6.33□□□□□ -1.4
BRCA1-229ENST00000621897 LSP1P33241 339 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 ID4P47928 161 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 DGCR2P98153 550 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 OCRLQ01968 901 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 SGMS1Q86VZ5 419 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 CXorf67Q86X51 503 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-229ENST00000621897 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 PPP1R14CQ8TAE6 165 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 FERMT2Q96AC1 680 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 OSBPL6Q9BZF3 934 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 IL23AQ9NPF7 189 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 MAPRE3Q9UPY8 281 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 PCDHB6Q9Y5E3 794 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 PPP2R3BQ9Y5P8 575 aa6.33□□□□□ -1.4
BRCA1-229ENST00000621897 UBE2QL1A1L167 161 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 DAPK3O43293 454 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 FSHBP01225 129 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 BPIP17213 487 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
BRCA1-229ENST00000621897 FOXE3Q13461 319 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 GAGE13Q4V321 117 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 BROXQ5VW32 411 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 KRT40Q6A162 431 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 UBR7Q8N806 425 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 SLC5A5Q92911 643 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 HIST1H2AHQ96KK5 128 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 HIST1H2AJQ99878 128 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 FDXACB1Q9BRP7 624 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-229ENST00000621897 PRDM12Q9H4Q4 367 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms