RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 NCKAP1LP55160 1127 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 KIAA0753Q2KHM9 967 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 RHPN2Q8IUC4 686 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 RAET1EQ8TD07 263 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 KAT2BQ92831 832 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 CFHR5Q9BXR6 569 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 NR3C1P04150 777 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 ARL2P36404 184 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 SLC26A2P50443 739 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 TAS1R3Q7RTX0 852 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 IFT74Q96LB3 600 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 AP5M1Q9H0R1 490 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 GBP3Q9H0R5 595 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 ZNF215Q9UL58 517 aaPredicted RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 TRAF3IP3Q9Y228 551 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 PDXKO00764 312 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 AKAP3O75969 853 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 GTF2BQ00403 316 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 CAPSQ13938 189 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 GNASQ5JWF2 1037 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 CBWD1Q9BRT8 395 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 TBX20Q9UMR3 447 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 HIC1Q14526 733 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 FSCN1Q16658 493 aaKnown RBP17.48■□□□□ 0.39
CBWD3-216ENST00000621396 NLRP4Q96MN2 994 aa17.48■□□□□ 0.39
CBWD3-216ENST00000621396 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
CBWD3-216ENST00000621396 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 ANKRD63C9JTQ0 380 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 C22orf31O95567 290 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 RFC5P40937 340 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 UBXN1Q04323 297 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 CCDC40Q4G0X9 1142 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 MARCH8Q5T0T0 291 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 NTPCRQ9BSD7 190 aaKnown RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 SUCLA2Q9P2R7 463 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 CALUO43852 315 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 FKTNO75072 461 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 VTNP04004 478 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 EDN1P05305 212 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 MAPTP10636 758 aaKnown RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 EEF1GP26641 437 aaKnown RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 ZNF200P98182 395 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-216ENST00000621396 TMEM62Q0P6H9 643 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 LAMTOR4Q0VGL1 99 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 LRMPQ12912 555 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 MIIPQ5JXC2 388 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 STXBP4Q6ZWJ1 553 aa17.47■□□□□ 0.39
CBWD3-216ENST00000621396 HOXD8P13378 290 aaPredicted RBP17.46■□□□□ 0.39
CBWD3-216ENST00000621396 KLK7P49862 253 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 GRIK4Q16099 956 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 CXCL17Q6UXB2 119 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 HS2ST1Q7LGA3 356 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 CPLX3Q8WVH0 158 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 EVPLQ92817 2033 aa17.46■□□□□ 0.39
CBWD3-216ENST00000621396 IGKV6-21A0A0C4DH24 114 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 CETN3O15182 167 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 SEPT4O43236 478 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 CBFA2T2O43439 604 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.38
CBWD3-216ENST00000621396 F2P00734 622 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 ADSSP30520 456 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 CPT1AP50416 773 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 SPAG1Q07617 926 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 VSTM4Q8IW00 320 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 DEPTORQ8TB45 409 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 ACCSQ96QU6 501 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 CTAGE1Q96RT6 745 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 C17orf75Q9HAS0 396 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 GINS2Q9Y248 185 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 TRIM17Q9Y577 477 aa17.46■□□□□ 0.38
CBWD3-216ENST00000621396 SLC39A4Q6P5W5 647 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.45■□□□□ 0.38
CBWD3-216ENST00000621396 SPIRE2Q8WWL2 714 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 PSPC1Q8WXF1 523 aaKnown RBP17.45■□□□□ 0.38
CBWD3-216ENST00000621396 HNRNPDLO14979 420 aaKnown RBP17.45■□□□□ 0.38
CBWD3-216ENST00000621396 SMIM10L2AP0DMW4 78 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 SMIM10L2BP0DMW5 78 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 RARBP10826 455 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 HOXD10P28358 340 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 CDC25BP30305 580 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 FILIP1LQ4L180 1135 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 MTHFD1LQ6UB35 978 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 SH3TC2Q8TF17 1288 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 SAAL1Q96ER3 474 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms