RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 COG5Q9UP83 839 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 SLC12A4Q9UP95 1085 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 PTGIRP43119 386 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 IFI35P80217 286 aaPredicted RBP21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 MSL1Q68DK7 614 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 LRRC34Q8IZ02 419 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 ANKS4BQ8N8V4 417 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 THAP2Q9H0W7 228 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 BHMT2Q9H2M3 363 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 TLDC2A0PJX2 215 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 FAM170AA1A519 330 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 TBX3O15119 743 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 TBCAO75347 108 aaKnown RBP21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 GSTA1P08263 222 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 IBSPP21815 317 aaPredicted RBP21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 POLD1P28340 1107 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 SLC29A2Q14542 456 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 Q4G0T1 1027 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 TBC1D22AQ8WUA7 517 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 GGA1Q9UJY5 639 aa21.18■□□□□ 0.98
PDLIM3-212ENST00000620787 RGS16O15492 202 aaPredicted RBP21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 ATP6V1G2O95670 118 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 SLC8A1P32418 973 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 PSMC2P35998 433 aaKnown RBP21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 FMO5P49326 533 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 AP3B2Q13367 1082 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 E2F5Q15329 346 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 AADACL2Q6P093 401 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 PALB2Q86YC2 1186 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 C18orf8Q96DM3 657 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 MTFR1LQ9H019 292 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 CCDC134Q9H6E4 229 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 OLFML3Q9NRN5 406 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 TMOD4Q9NZQ9 345 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 TRPC6Q9Y210 931 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 SMIM23A6NLE4 172 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 PHF2O75151 1096 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 EZRP15311 586 aaKnown RBP21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 CYP4A11Q02928 519 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 NBPF9Q3BBW0 867 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 COL23A1Q86Y22 540 aaPredicted RBP21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 RASAL2Q9UJF2 1139 aa21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.17■□□□□ 0.98
PDLIM3-212ENST00000620787 AGTP01019 485 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 RPL21P46778 160 aaKnown RBP21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 CLUL1Q15846 466 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 HIBCHQ6NVY1 386 aaPredicted RBP21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 SEMA4AQ9H3S1 761 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 CNOT7Q9UIV1 285 aaKnown RBP21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 ANKRD62A6NC57 917 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 SFI1A8K8P3 1242 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 FAM86B1E9PN63 330 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 FAM86B2P0C5J1 330 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 KRT13P13646 458 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 PPP1R7Q15435 360 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 NFIL3Q16649 462 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 CBWD6Q4V339 395 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 CBWD3Q5JTY5 395 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 CBWD5Q5RIA9 395 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 PRMT1Q99873 361 aaKnown RBP21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 INTS9Q9NV88 658 aaKnown RBP21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 VAV3Q9UKW4 847 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 SUFUQ9UMX1 484 aa21.16■□□□□ 0.98
PDLIM3-212ENST00000620787 MPHOSPH10O00566 681 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 EIF3DO15371 548 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 EYA4O95677 639 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 TNFAIP3P21580 790 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 ADCY2Q08462 1091 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 C6orf118Q5T5N4 469 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 PRELID2Q8N945 189 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 TMEM109Q9BVC6 243 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 INTS2Q9H0H0 1204 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 ATP6V0A4Q9HBG4 840 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 VEZTQ9HBM0 779 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 NOD2Q9HC29 1040 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 RABGAP1Q9Y3P9 1069 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 PCDHA3Q9Y5H8 950 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 GAP43P17677 238 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 NMT1P30419 496 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 SF3A3Q12874 501 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 COG2Q14746 738 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 TNFAIP8L3Q5GJ75 292 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 TLDC1Q6P9B6 456 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 CNBD1Q8NA66 436 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 EPS8L3Q8TE67 593 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 ELAC2Q9BQ52 826 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 ALG6Q9Y672 507 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 BTAF1O14981 1849 aa21.15■□□□□ 0.98
PDLIM3-212ENST00000620787 SYNGAP1Q96PV0 1343 aa21.14■□□□□ 0.98
PDLIM3-212ENST00000620787 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 KIF1CO43896 1103 aaKnown RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 PPP1R12BO60237 982 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 CHRNA3P32297 505 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 HADHBP55084 474 aaKnown RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 RINT1Q6NUQ1 792 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 TTC27Q6P3X3 843 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms