RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZBED4O75132 1171 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PALMO75781 387 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 POLR2MP0CAP2 368 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 FCER1AP12319 257 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PTPRAP18433 802 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 CALRP27797 417 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 CARSP49589 748 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 BACE1P56817 501 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 STK4Q13043 487 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 SNCBQ16143 134 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT71Q3SY84 523 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 KDM7AQ6ZMT4 941 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 LDHDQ86WU2 507 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 MTRQ99707 1265 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 RAVER2Q9HCJ3 691 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 DDX25Q9UHL0 483 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 SERPING1P05155 500 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 MDH1P40925 334 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 UBXN2AP68543 259 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 LRRC63Q05C16 580 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 KCNH2Q12809 1159 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PRPF4BQ13523 1007 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PLS1Q14651 629 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 GKAP1Q5VSY0 366 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 NAA35Q5VZE5 725 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 SNX29Q8TEQ0 813 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 MS4A14Q96JA4 679 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 AGBL1Q96MI9 1066 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 CCT8L2Q96SF2 557 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 A0A1B0GUA9 196 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 GRID2IPA4D2P6 1211 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 GLTPD2A6NH11 291 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 FOSP01100 380 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 VCAM1P19320 739 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 IREB2P48200 963 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 TAX1BP1Q86VP1 789 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 MYOCDQ8IZQ8 938 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 TBC1D5Q92609 795 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PRDM16Q9HAZ2 1276 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 KBTBD4Q9NVX7 518 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 ARHGAP20Q9P2F6 1191 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 PCDHGB7Q9Y5F8 929 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 GOLGA6L10A0A0M3HER8 536 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 IQCA1LA6NCM1 817 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 PRPHP41219 470 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 PRR16Q569H4 304 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 TTMPQ5BVD1 217 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 TCERG1LQ5VWI1 586 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 ARMC9Q7Z3E5 817 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 EXOC8Q8IYI6 725 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 LARP4BQ92615 738 aaKnown RBP7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC113Q9H0I3 377 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 KLC4Q9NSK0 619 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 STK17AQ9UEE5 414 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 PPME1Q9Y570 386 aa7.59□□□□□ -1.2
SRGAP3-213ENST00000618999 FOCADQ5VW36 1801 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 ECM29Q5VYK3 1845 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SSU72P8A0A1W2PR75 194 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 ARHGAP4P98171 946 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 AP3B2Q13367 1082 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CUL1Q13616 776 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 IL17AQ16552 155 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 PTGISQ16647 500 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 PDXDC1Q6P996 788 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 USP50Q70EL3 339 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 DYDC1Q8WWB3 177 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 DUSP9Q99956 384 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SH3GL2Q99962 352 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SELENOSQ9BQE4 189 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 ODF2LQ9ULJ1 636 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 UTP11Q9Y3A2 253 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 GMNCA6NCL1 334 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SMAPO00193 183 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 KRIT1O00522 736 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC37A4O43826 429 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 USP2O75604 605 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CLSTN1O94985 981 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 GNA14O95837 355 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM107AO95990 144 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SEC24CP53992 1094 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 FKBP3Q00688 224 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 DRP2Q13474 957 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 MOB2Q70IA6 237 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 UNC13DQ70J99 1090 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 HOOK3Q86VS8 718 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 TEX2Q8IWB9 1127 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC65Q8IXS2 484 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 C4orf32Q8N8J7 132 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 OTUD5Q96G74 571 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 C7orf25Q9BPX7 421 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 TACO1Q9BSH4 297 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 EDEM3Q9BZQ6 932 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 TAF1DQ9H5J8 278 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CCSER2Q9H7U1 834 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SAMD15Q9P1V8 674 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms