RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ITGB1P05556 798 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 CDC42EP1Q00587 391 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 COL19A1Q14993 1142 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 XKR9Q5GH70 373 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 EP400NLQ6ZTU2 488 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 OTUD6AQ7L8S5 288 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 ZNF410Q86VK4 478 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 ECHDC2Q86YB7 292 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 MTMR9Q96QG7 549 aa24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 ELAC1Q9H777 363 aaKnown RBP24.67■■□□□ 1.54
SYNGR3-206ENST00000618464 SLITRK3O94933 977 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 RFC5P40937 340 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 GNL2Q13823 731 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 RABEP1Q15276 862 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 GJD3Q8N144 294 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 P2RX5Q93086 422 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 DHX33Q9H6R0 707 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 C11orf16Q9NQ32 467 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 RNF19AQ9NV58 838 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 TYW1Q9NV66 732 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 COL4A3BPQ9Y5P4 624 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 MYO7AQ13402 2215 aa24.66■■□□□ 1.54
SYNGR3-206ENST00000618464 SFPQP23246 707 aaKnown RBP eCLIP24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 DNAJB1P25685 340 aa24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 EMC2Q15006 297 aa24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 FBXO18Q8NFZ0 1043 aa24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 CLDND1Q9NY35 253 aa24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 PPME1Q9Y570 386 aa24.65■■□□□ 1.54
SYNGR3-206ENST00000618464 ARID2Q68CP9 1835 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 FAM86C2PA6NEL3 165 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 POTEMA6NI47 508 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 PI4K2BG5E9Z4 385 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 SRGAP2CP0DJJ0 459 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 ZNF174Q15697 407 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 NAALADL2Q58DX5 795 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 TMEM31Q5JXX7 168 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 ABI1Q8IZP0 508 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 SPPL3Q8TCT6 385 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 PRPF31Q8WWY3 499 aaKnown RBP24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 PSPC1Q8WXF1 523 aaKnown RBP24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 HSD17B14Q9BPX1 270 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 TMEM117Q9H0C3 514 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 FOXP1Q9H334 677 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 PIN4Q9Y237 131 aaKnown RBP24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 PCDHB12Q9Y5F1 795 aa24.64■■□□□ 1.54
SYNGR3-206ENST00000618464 A0A087WWV3 80 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 HOXA2O43364 376 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 LTBRP36941 435 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 HYAL1Q12794 435 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 CAMK1Q14012 370 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 PUS10Q3MIT2 529 aaKnown RBP24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 TWF2Q6IBS0 349 aaKnown RBP24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 CATSPER4Q7RTX7 472 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 EXOC8Q8IYI6 725 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 COLGALT1Q8NBJ5 622 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 POF1BQ8WVV4 589 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 CASD1Q96PB1 797 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 INO80BQ9C086 356 aaPredicted RBP24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 UPF2Q9HAU5 1272 aaKnown RBP24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 IFT122Q9HBG6 1241 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 AAASQ9NRG9 546 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 DACT1Q9NYF0 836 aa24.63■■□□□ 1.53
SYNGR3-206ENST00000618464 A0A0U1RQF3 1178 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 ST18O60284 1047 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 SSTR3P32745 418 aaPredicted RBP24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 LAMTOR4Q0VGL1 99 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 CLLU1OSQ5K130 101 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 CCDC43Q96MW1 224 aaKnown RBP24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 MTRQ99707 1265 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 IGFLR1Q9H665 355 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 CWH43Q9H720 699 aa24.62■■□□□ 1.53
SYNGR3-206ENST00000618464 GPR37L1O60883 481 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 ATF7P17544 494 aaPredicted RBP24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 GTF2F1P35269 517 aaKnown RBP eCLIP24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 IRS1P35568 1242 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 DLX2Q07687 328 aaPredicted RBP24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 CTC1Q2NKJ3 1217 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 LONRF3Q496Y0 759 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 TTC38Q5R3I4 469 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 LRRC55Q6ZSA7 311 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 NOSTRINQ8IVI9 506 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 THNSL1Q8IYQ7 743 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 HELQQ8TDG4 1101 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 PIGOQ8TEQ8 1089 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 TCP11Q8WWU5 503 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 CHST12Q9NRB3 414 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 PCDHGC5Q9Y5F6 944 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 PLXNA4Q9HCM2 1894 aa24.61■■□□□ 1.53
SYNGR3-206ENST00000618464 GAS2O43903 313 aaKnown RBP24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 FGF18O76093 207 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 LYPLA2O95372 231 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 OR52Z1P0C646 297 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 LAG3P18627 525 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 TECP42680 631 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 NBR1Q14596 966 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 ZNF598Q86UK7 904 aaKnown RBP24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 FERMT3Q86UX7 667 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 LRRC43Q8N309 656 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 MINDY3Q9H8M7 445 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 XPNPEP1Q9NQW7 623 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms