RNA–Protein interactions for RNA: ENST00000617888.1

LINC01971-201, Transcript of long intergenic non-protein coding RNA 1971, humanhuman

BASIC

Gene LINC01971, Length 1,048 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01971-201ENST00000617888 SMC3Q9UQE7 1217 aa28.82■■■□□ 2.2
LINC01971-201ENST00000617888 CSDE1O75534 798 aaKnown RBP28.81■■■□□ 2.2
LINC01971-201ENST00000617888 RARRES1P49788 294 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 GATMP50440 423 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 LAMTOR4Q0VGL1 99 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 AAK1Q2M2I8 961 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 FERMT3Q86UX7 667 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 ECHDC2Q86YB7 292 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 ASB2Q96Q27 587 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 TRAIPQ9BWF2 469 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 IFT122Q9HBG6 1241 aa28.81■■■□□ 2.2
LINC01971-201ENST00000617888 BMP2KQ9NSY1 1161 aaPredicted RBP28.81■■■□□ 2.2
LINC01971-201ENST00000617888 A0A0U1RQF3 1178 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 TBKBP1A7MCY6 615 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 SPATA31C1P0DKV0 1188 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 TOB1P50616 345 aaPredicted RBP28.8■■■□□ 2.2
LINC01971-201ENST00000617888 FXR2P51116 673 aaKnown RBP eCLIP28.8■■■□□ 2.2
LINC01971-201ENST00000617888 MXD4Q14582 209 aaPredicted RBP28.8■■■□□ 2.2
LINC01971-201ENST00000617888 FAM102BQ5T8I3 360 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 HAUS3Q68CZ6 603 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 SRGAP1Q7Z6B7 1085 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 CATSPER3Q86XQ3 398 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 C4orf32Q8N8J7 132 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 COL25A1Q9BXS0 654 aaPredicted RBP28.8■■■□□ 2.2
LINC01971-201ENST00000617888 TMEM117Q9H0C3 514 aa28.8■■■□□ 2.2
LINC01971-201ENST00000617888 H3BQV1 296 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 LAD1O00515 517 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 EOMESO95936 686 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 RPA1P27694 616 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 NBR1Q14596 966 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 MCTP1Q6DN14 999 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 CATSPER4Q7RTX7 472 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 HLA-CQ95604 372 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 XPNPEP1Q9NQW7 623 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 AAASQ9NRG9 546 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 VCANP13611 3396 aa28.79■■■□□ 2.2
LINC01971-201ENST00000617888 ARID2Q68CP9 1835 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 REV3LO60673 3130 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 SRGAP2CP0DJJ0 459 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 FGFR1P11362 822 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 SKIP12755 728 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 MUTP22033 750 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 RILPL1Q5EBL4 403 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 PIGOQ8TEQ8 1089 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 NACC1Q96RE7 527 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 RAB34Q9BZG1 259 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 DBR1Q9UK59 544 aaKnown RBP28.78■■■□□ 2.2
LINC01971-201ENST00000617888 PIN4Q9Y237 131 aaKnown RBP28.78■■■□□ 2.2
LINC01971-201ENST00000617888 STK24Q9Y6E0 443 aa28.78■■■□□ 2.2
LINC01971-201ENST00000617888 MED24O75448 989 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 TFDP1Q14186 410 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 PCBP1Q15365 356 aaKnown RBP eCLIP28.77■■■□□ 2.2
LINC01971-201ENST00000617888 ABI1Q8IZP0 508 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 RNF149Q8NC42 400 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 RSPH1Q8WYR4 309 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 NSUN3Q9H649 340 aaKnown RBP28.77■■■□□ 2.2
LINC01971-201ENST00000617888 AGPAT5Q9NUQ2 364 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 PLAGL2Q9UPG8 496 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 PCDHB6Q9Y5E3 794 aa28.77■■■□□ 2.2
LINC01971-201ENST00000617888 GRM6O15303 877 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 PHKA2P46019 1235 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 POU5F1BQ06416 359 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 PTGDRQ13258 359 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 CSPP1Q1MSJ5 1256 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 TWF2Q6IBS0 349 aaKnown RBP28.76■■■□□ 2.19
LINC01971-201ENST00000617888 ZNF598Q86UK7 904 aaKnown RBP28.76■■■□□ 2.19
LINC01971-201ENST00000617888 RNF19AQ9NV58 838 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 PCDHB12Q9Y5F1 795 aa28.76■■■□□ 2.19
LINC01971-201ENST00000617888 CUL9Q8IWT3 2517 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 PRPHP41219 470 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 RAB27AP51159 221 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 PDIA5Q14554 519 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 SPOUT1Q5T280 376 aaKnown RBP28.75■■■□□ 2.19
LINC01971-201ENST00000617888 LRRC43Q8N309 656 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 CASD1Q96PB1 797 aa28.75■■■□□ 2.19
LINC01971-201ENST00000617888 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.75■■■□□ 2.19
LINC01971-201ENST00000617888 FNDC1Q4ZHG4 1894 aaPredicted RBP28.74■■■□□ 2.19
LINC01971-201ENST00000617888 LAG3P18627 525 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 ARL2P36404 184 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 CUL4AQ13619 759 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 POTEGQ6S5H5 508 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 KLHL23Q8NBE8 558 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 RNF169Q8NCN4 708 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 MCPH1Q8NEM0 835 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 TYW1Q9NV66 732 aaKnown RBP28.74■■■□□ 2.19
LINC01971-201ENST00000617888 LRWD1Q9UFC0 647 aa28.74■■■□□ 2.19
LINC01971-201ENST00000617888 XIRP2A4UGR9 3374 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 USO1O60763 962 aaKnown RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 ITGB1P05556 798 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 ATF7P17544 494 aaPredicted RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 PTENP60484 403 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 TFF2Q03403 129 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 LARP1BQ659C4 914 aaKnown RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 IFNLR1Q8IU57 520 aaPredicted RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 IGSF22Q8N9C0 903 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 NFKBIZQ9BYH8 718 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 MINDY3Q9H8M7 445 aa28.73■■■□□ 2.19
LINC01971-201ENST00000617888 ALG13Q9NP73 1137 aaKnown RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 SPTBN5Q9NRC6 3674 aaKnown RBP28.73■■■□□ 2.19
LINC01971-201ENST00000617888 FAM105AQ9NUU6 356 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms